DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
TRPKLKKMK
Uniprot ID:
O14511
Source protein:
Pro-neuregulin-2, membrane-bound isoform
Source gene:
NRG2
Class:
DEG_APCC_DBOX_1
Location:
235:243
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9931
ASA_SCORE:
95.7889
COIL:
0.6668
CONS_SCORE:
0.582
DSS_SCORE:
0.3785
HELIX:
0.146
FCONS_SCORE:
1.2561
RIG_SCORE:
0.7881
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R236P
TCGA-66-2787
LUSC
TCGA
TRPKLKKMK
DEG_APCC_DBOX_1
0.7512
p.R236P
DO26647
LUSC
ICGC
TRPKLKKMK
DEG_APCC_DBOX_1
0.7512
p.T246M
TCGA-AA-A01R
COAD
TCGA
TRPKLKKMK
DEG_APCC_DBOX_1
0.25
p.T246M
TCGA-D9-A6EG
SKCM
TCGA
TRPKLKKMK
DEG_APCC_DBOX_1
0.25
p.T246M
DO7934
COAD
ICGC
TRPKLKKMK
DEG_APCC_DBOX_1
0.25
p.T246M
DO50292
SKCM
ICGC
TRPKLKKMK
DEG_APCC_DBOX_1
0.25
p.K241N
TCGA-AO-A03M
BRCA
TCGA
TRPKLKKMK
DEG_APCC_DBOX_1
0.5806
p.K241N
DO2216
BRCA
ICGC
TRPKLKKMK
DEG_APCC_DBOX_1
0.5806
p.K243N
TCGA-B5-A11E
UCEC
TCGA
TRPKLKKMK
DEG_APCC_DBOX_1
0.5806
p.K243N
DO41644
UCEC
ICGC
TRPKLKKMK
DEG_APCC_DBOX_1
0.5806
p.G247E
TCGA-EE-A2MU
SKCM
TCGA
TRPKLKKMK
DEG_APCC_DBOX_1
0.2222
p.G247E
DO37436
SKCM
ICGC
TRPKLKKMK
DEG_APCC_DBOX_1
0.2222
p.V225M
DO231620
LINC
ICGC
TRPKLKKMK
DEG_APCC_DBOX_1
0.0556
p.C233S
DO229234
THCA
ICGC
TRPKLKKMK
DEG_APCC_DBOX_1
0.2778
p.M242I
SIDM00550
Esophageal Squamous Cell Carcinoma
GDSC
TRPKLKKMK
DEG_APCC_DBOX_1
0.6507
p.M242I
ACH-002264
Esophageal Cancer
CCLE
TRPKLKKMK
DEG_APCC_DBOX_1
0.6507
p.M242I
KYSE-50
oesophagus
COSMIC
TRPKLKKMK
DEG_APCC_DBOX_1
0.6507
p.P244L
SCH
stomach
COSMIC
TRPKLKKMK
DEG_APCC_DBOX_1
0.3056
p.P244L
RERF-LC-FM
lung
COSMIC
TRPKLKKMK
DEG_APCC_DBOX_1
0.3056
Drug responses associated with NRG2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRPKLKKMK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14511
Pro-neuregulin-2, membrane-bound isoform
DEG_APCC_DBOX_1
235:243
TRPKLKKMK
APC,CDC20,FZR1
0.9931
More...