DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRPKLTALA
Uniprot ID:
Q8NA56
Source protein:
Tetratricopeptide repeat protein 29
Source gene:
TTC29
Class:
DEG_APCC_DBOX_1
Location:
10:18
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9349
ASA_SCORE:
85.6889
COIL:
0.6057
CONS_SCORE:
0.5832
DSS_SCORE:
0.5585
HELIX:
0.3841
FCONS_SCORE:
1.0468
RIG_SCORE:
0.7691
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R11C
TCGA-55-6975
LUAD
TCGA
TRPKLTALA
DEG_APCC_DBOX_1
0.8301
p.R11S
TCGA-56-7222
LUSC
TCGA
TRPKLTALA
DEG_APCC_DBOX_1
0.7427
p.A18P
TCGA-99-8025
LUAD
TCGA
TRPKLTALA
DEG_APCC_DBOX_1
0.6392
p.P12L
TCGA-FR-A69P
SKCM
TCGA
TRPKLTALA
DEG_APCC_DBOX_1
0.6471
p.R19T
TCGA-HF-7134
STAD
TCGA
TRPKLTALA
DEG_APCC_DBOX_1
0.3056
p.S25Y
DO50092
COAD
ICGC
TRPKLTALA
DEG_APCC_DBOX_1
0.1389
p.P3L
DO50346
ESAD
ICGC
TRPKLTALA
DEG_APCC_DBOX_1
0.25
p.T8I
DO228974
LICA
ICGC
TRPKLTALA
DEG_APCC_DBOX_1
0.3889
p.G13E
DO26710
LUSC
ICGC
TRPKLTALA
DEG_APCC_DBOX_1
0.7199
p.E26K
DO47362
SKCM
ICGC
TRPKLTALA
DEG_APCC_DBOX_1
0.1111
p.E26K
DO38123
SKCM
ICGC
TRPKLTALA
DEG_APCC_DBOX_1
0.1111
p.R11H
HT-115
large_intestine
COSMIC
TRPKLTALA
DEG_APCC_DBOX_1
0.8244
Drug responses associated with TTC29 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRPKLTALA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NA56
Tetratricopeptide repeat protein 29
DEG_APCC_DBOX_1
10:18
TRPKLTALA
APC,CDC20,FZR1
0.9349
More...