DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
TRPLLRQIE
Uniprot ID:
P82094
Source protein:
TATA element modulatory factor
Source gene:
TMF1
Class:
DEG_APCC_DBOX_1
Location:
768:776
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8811
ASA_SCORE:
98.3889
COIL:
0.116
CONS_SCORE:
0.7175
DSS_SCORE:
0.4608
HELIX:
0.8776
FCONS_SCORE:
1.4397
RIG_SCORE:
0.7675
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T768I
TCGA-96-A4JK
LUSC
TCGA
TRPLLRQIE
DEG_APCC_DBOX_1
0.5966
p.T768I
DO45442
LUSC
ICGC
TRPLLRQIE
DEG_APCC_DBOX_1
0.5966
p.Q779H
TCGA-A5-A0G1
UCEC
TCGA
TRPLLRQIE
DEG_APCC_DBOX_1
0.25
p.Q779H
DO42472
UCEC
ICGC
TRPLLRQIE
DEG_APCC_DBOX_1
0.25
p.S761G
TCGA-E6-A1LX
UCEC
TCGA
TRPLLRQIE
DEG_APCC_DBOX_1
0.1389
p.S761G
DO41020
UCEC
ICGC
TRPLLRQIE
DEG_APCC_DBOX_1
0.1389
p.Q782K
DO230343
COCA
ICGC
TRPLLRQIE
DEG_APCC_DBOX_1
0.1667
p.R759Q
DO230659
LAML
ICGC
TRPLLRQIE
DEG_APCC_DBOX_1
0.0833
p.R759Q
DO231140
LAML
ICGC
TRPLLRQIE
DEG_APCC_DBOX_1
0.0833
p.R759Q
SIDM00297
Non-Small Cell Lung Carcinoma
GDSC
TRPLLRQIE
DEG_APCC_DBOX_1
0.0833
p.R759Q
SIDM00606
Squamous Cell Lung Carcinoma
GDSC
TRPLLRQIE
DEG_APCC_DBOX_1
0.0833
p.R759Q
SIDM01551
Gastric Carcinoma
GDSC
TRPLLRQIE
DEG_APCC_DBOX_1
0.0833
p.R759Q
SIDM01451
Pancreatic Carcinoma
GDSC
TRPLLRQIE
DEG_APCC_DBOX_1
0.0833
p.L765I
CW-2
large_intestine
COSMIC
TRPLLRQIE
DEG_APCC_DBOX_1
0.25
p.E768G
EN
endometrium
COSMIC
TRPLLRQIE
DEG_APCC_DBOX_1
0.7199
Drug responses associated with TMF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRPLLRQIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P82094
TATA element modulatory factor
DEG_APCC_DBOX_1
768:776
TRPLLRQIE
APC,CDC20,FZR1
0.8811
More...