DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRPVLGLLV
Uniprot ID:
Q8NFJ9
Source protein:
Bardet-Biedl syndrome 1 protein
Source gene:
BBS1
Class:
DEG_APCC_DBOX_1
Location:
511:519
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5373
ASA_SCORE:
54.5444
COIL:
0.6616
CONS_SCORE:
0.3762
DSS_SCORE:
0.0146
HELIX:
0.0242
FCONS_SCORE:
0.8519
RIG_SCORE:
0.9376
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q506H
TCGA-28-1752
GBM
TCGA
TRPVLGLLV
DEG_APCC_DBOX_1
0.1944
p.Q506H
DO12388
GBM
ICGC
TRPVLGLLV
DEG_APCC_DBOX_1
0.1944
p.R512C
TCGA-2W-A8YY
CESC
TCGA
TRPVLGLLV
DEG_APCC_DBOX_1
0.8301
p.R512C
TCGA-EO-A22R
UCEC
TCGA
TRPVLGLLV
DEG_APCC_DBOX_1
0.8301
p.R512C
DO223732
CESC
ICGC
TRPVLGLLV
DEG_APCC_DBOX_1
0.8301
p.R512C
DO42713
UCEC
ICGC
TRPVLGLLV
DEG_APCC_DBOX_1
0.8301
p.R512H
TCGA-DS-A0VN
CESC
TCGA
TRPVLGLLV
DEG_APCC_DBOX_1
0.8244
p.R512H
DO6269
CESC
ICGC
TRPVLGLLV
DEG_APCC_DBOX_1
0.8244
p.P513S
TCGA-FS-A1ZK
SKCM
TCGA
TRPVLGLLV
DEG_APCC_DBOX_1
0.5641
p.P513S
DO37474
SKCM
ICGC
TRPVLGLLV
DEG_APCC_DBOX_1
0.5641
p.L518V
TCGA-SC-A6LN
MESO
TCGA
TRPVLGLLV
DEG_APCC_DBOX_1
0.5654
p.E525K
DO229058
LICA
ICGC
TRPVLGLLV
DEG_APCC_DBOX_1
0.1667
p.R512S
SIDM00501
Oral Cavity Carcinoma
GDSC
TRPVLGLLV
DEG_APCC_DBOX_1
0.7427
p.R512S
BICR78
upper_aerodigestive_tract
COSMIC
TRPVLGLLV
DEG_APCC_DBOX_1
0.7427
p.L505P
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
TRPVLGLLV
DEG_APCC_DBOX_1
0.1667
p.L505P
NCI-H1648
lung
COSMIC
TRPVLGLLV
DEG_APCC_DBOX_1
0.1667
Drug responses associated with BBS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRPVLGLLV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFJ9
Bardet-Biedl syndrome 1 protein
DEG_APCC_DBOX_1
511:519
TRPVLGLLV
APC,CDC20,FZR1
0.5373
More...