DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRQYLYCLK
Uniprot ID:
A5PLN9
Source protein:
Trafficking protein particle complex subunit 13
Source gene:
TRAPPC13
Class:
DEG_APCC_DBOX_1
Location:
248:256
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5205
ASA_SCORE:
43.3444
COIL:
0.3492
CONS_SCORE:
0.5946
DSS_SCORE:
0.1393
HELIX:
0.0922
FCONS_SCORE:
1.7369
RIG_SCORE:
0.9311
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R249C
TCGA-A5-A1OF
UCEC
TCGA
TRQYLYCLK
DEG_APCC_DBOX_1
0.8301
p.R240T
TCGA-L3-A524
LUSC
TCGA
TRQYLYCLK
DEG_APCC_DBOX_1
0.1111
p.Y251C
DO233773
GACA
ICGC
TRQYLYCLK
DEG_APCC_DBOX_1
0.5976
p.A241S
DO228971
LICA
ICGC
TRQYLYCLK
DEG_APCC_DBOX_1
0.1389
p.G238W
DO229038
LICA
ICGC
TRQYLYCLK
DEG_APCC_DBOX_1
0.0556
p.R243C
DO42568
UCEC
ICGC
TRQYLYCLK
DEG_APCC_DBOX_1
0.1944
p.P245L
SIDM00683
Prostate Carcinoma
GDSC
TRQYLYCLK
DEG_APCC_DBOX_1
0.25
p.P245L
ACH-000977
lymph_node
CCLE
TRQYLYCLK
DEG_APCC_DBOX_1
0.25
p.P245L
LNCaP-Clone-FGC
prostate
COSMIC
TRQYLYCLK
DEG_APCC_DBOX_1
0.25
p.K258N
SIDM01588
Endometrial Carcinoma
GDSC
TRQYLYCLK
DEG_APCC_DBOX_1
0.2778
p.K258N
ACH-000993
Endometrial/Uterine Cancer
CCLE
TRQYLYCLK
DEG_APCC_DBOX_1
0.2778
p.P239L
LNCaP-Clone-FGC
prostate
COSMIC
TRQYLYCLK
DEG_APCC_DBOX_1
0.0833
Drug responses associated with TRAPPC13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRQYLYCLK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A5PLN9
Trafficking protein particle complex subunit 13
DEG_APCC_DBOX_1
248:256
TRQYLYCLK
APC,CDC20,FZR1
0.5205
More...