DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRRELLGLS
Uniprot ID:
Q5VVW2
Source protein:
GTPase-activating Rap/Ran-GAP domain-like protein 3
Source gene:
GARNL3
Class:
DEG_APCC_DBOX_1
Location:
909:917
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8113
ASA_SCORE:
81.8444
COIL:
0.4609
CONS_SCORE:
0.3246
DSS_SCORE:
0.5458
HELIX:
0.5187
FCONS_SCORE:
1.0862
RIG_SCORE:
0.7036
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R911S
TCGA-EE-A20F
SKCM
TCGA
TRRELLGLS
DEG_APCC_DBOX_1
0.6316
p.G920V
TCGA-GV-A3JZ
BLCA
TCGA
TRRELLGLS
DEG_APCC_DBOX_1
0.25
p.Q920R
DO7783
COAD
ICGC
TRRELLGLS
DEG_APCC_DBOX_1
0.25
p.P906S
DO8514
COAD
ICGC
TRRELLGLS
DEG_APCC_DBOX_1
0.25
p.K901N
DO229045
LICA
ICGC
TRRELLGLS
DEG_APCC_DBOX_1
0.1111
p.K907T
DO48020
STAD
ICGC
TRRELLGLS
DEG_APCC_DBOX_1
0.2778
p.A927V
DO42472
UCEC
ICGC
TRRELLGLS
DEG_APCC_DBOX_1
0.0556
p.R915W
DO41361
UCEC
ICGC
TRRELLGLS
DEG_APCC_DBOX_1
0.8634
p.R915W
DO41331
UCEC
ICGC
TRRELLGLS
DEG_APCC_DBOX_1
0.8634
p.T909A
SIDM00837
Colorectal Carcinoma
GDSC
TRRELLGLS
DEG_APCC_DBOX_1
0.6028
p.T909A
ACH-000958
Colon/Colorectal Cancer
CCLE
TRRELLGLS
DEG_APCC_DBOX_1
0.6028
p.T909A
SW48
large_intestine
COSMIC
TRRELLGLS
DEG_APCC_DBOX_1
0.6028
Drug responses associated with GARNL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRRELLGLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VVW2
GTPase-activating Rap/Ran-GAP domain-like protein 3
DEG_APCC_DBOX_1
909:917
TRRELLGLS
APC,CDC20,FZR1
0.8113
More...