DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRSNLRILP
Uniprot ID:
Q5T4T6
Source protein:
Synaptonemal complex protein 2-like
Source gene:
SYCP2L
Class:
DEG_APCC_DBOX_1
Location:
539:547
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5969
ASA_SCORE:
108.5
COIL:
0.8903
CONS_SCORE:
0.5334
DSS_SCORE:
0.603
HELIX:
0.0538
FCONS_SCORE:
0.9301
RIG_SCORE:
0.7186
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R540I
TCGA-EO-A3B0
UCEC
TCGA
TRSNLRILP
DEG_APCC_DBOX_1
0.8102
p.R540I
DO219773
UCEC
ICGC
TRSNLRILP
DEG_APCC_DBOX_1
0.8102
p.S553G
TCGA-HE-A5NI
KIRP
TCGA
TRSNLRILP
DEG_APCC_DBOX_1
0.1667
p.S553G
DO49767
KIRP
ICGC
TRSNLRILP
DEG_APCC_DBOX_1
0.1667
p.G556V
DO229026
LICA
ICGC
TRSNLRILP
DEG_APCC_DBOX_1
0.0833
p.G554V
DO229032
LICA
ICGC
TRSNLRILP
DEG_APCC_DBOX_1
0.1389
p.G554V
DO229037
LICA
ICGC
TRSNLRILP
DEG_APCC_DBOX_1
0.1389
p.P550S
DO222662
MELA
ICGC
TRSNLRILP
DEG_APCC_DBOX_1
0.25
Drug responses associated with SYCP2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRSNLRILP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T4T6
Synaptonemal complex protein 2-like
DEG_APCC_DBOX_1
539:547
TRSNLRILP
APC,CDC20,FZR1
0.5969
More...