DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRVILRMLP
Uniprot ID:
Q9NXG2
Source protein:
THUMP domain-containing protein 1
Source gene:
THUMPD1
Class:
DEG_APCC_DBOX_1
Location:
156:164
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6529
ASA_SCORE:
38.0222
COIL:
0.2856
CONS_SCORE:
0.6545
DSS_SCORE:
0.1862
HELIX:
0.0127
FCONS_SCORE:
1.4393
RIG_SCORE:
0.8999
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K152T
TCGA-A5-A0G2
UCEC
TCGA
TRVILRMLP
DEG_APCC_DBOX_1
0.3333
p.K152T
DO41235
UCEC
ICGC
TRVILRMLP
DEG_APCC_DBOX_1
0.3333
p.Y149H
TCGA-AA-A00N
COAD
TCGA
TRVILRMLP
DEG_APCC_DBOX_1
0.1389
p.Y149H
DO9876
COAD
ICGC
TRVILRMLP
DEG_APCC_DBOX_1
0.1389
p.R157Q
TCGA-EO-A3B0
UCEC
TCGA
TRVILRMLP
DEG_APCC_DBOX_1
0.7329
p.R157Q
DO219773
UCEC
ICGC
TRVILRMLP
DEG_APCC_DBOX_1
0.7329
p.R161Q
SIDM00500
Colorectal Carcinoma
GDSC
TRVILRMLP
DEG_APCC_DBOX_1
0.6218
p.D147N
ACH-001127
Leukemia
CCLE
TRVILRMLP
DEG_APCC_DBOX_1
0.0833
Drug responses associated with THUMPD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRVILRMLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NXG2
THUMP domain-containing protein 1
DEG_APCC_DBOX_1
156:164
TRVILRMLP
APC,CDC20,FZR1
0.6529
More...