DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRVLLATLS
Uniprot ID:
Q14152
Source protein:
Eukaryotic translation initiation factor 3 subunit A
Source gene:
EIF3A
Class:
DEG_APCC_DBOX_1
Location:
320:328
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8129
ASA_SCORE:
16.0444
COIL:
0.0982
CONS_SCORE:
0.6655
DSS_SCORE:
0.2783
HELIX:
0.8941
FCONS_SCORE:
1.6068
RIG_SCORE:
0.8409
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T336M
TCGA-AD-5900
COAD
TCGA
TRVLLATLS
DEG_APCC_DBOX_1
0.1111
p.T336M
TCGA-FP-A4BE
STAD
TCGA
TRVLLATLS
DEG_APCC_DBOX_1
0.1111
p.R335H
TCGA-AX-A05Z
UCEC
TCGA
TRVLLATLS
DEG_APCC_DBOX_1
0.1389
p.R335H
TCGA-CM-4743
COAD
TCGA
TRVLLATLS
DEG_APCC_DBOX_1
0.1389
p.S319P
TCGA-BR-8680
STAD
TCGA
TRVLLATLS
DEG_APCC_DBOX_1
0.3056
p.G312V
DO8312
COAD
ICGC
TRVLLATLS
DEG_APCC_DBOX_1
0.1111
p.R320H
DO233624
GACA
ICGC
TRVLLATLS
DEG_APCC_DBOX_1
0.8244
p.P330L
DO45547
LUSC
ICGC
TRVLLATLS
DEG_APCC_DBOX_1
0.2778
p.R320C
DO37406
SKCM
ICGC
TRVLLATLS
DEG_APCC_DBOX_1
0.8301
p.M310I
DO47636
SKCM
ICGC
TRVLLATLS
DEG_APCC_DBOX_1
0.0556
p.P330T
DO47569
SKCM
ICGC
TRVLLATLS
DEG_APCC_DBOX_1
0.2778
p.P330S
SIDM01146
Gastric Carcinoma
GDSC
TRVLLATLS
DEG_APCC_DBOX_1
0.2778
p.P330S
ACH-000932
Gastric Cancer
CCLE
TRVLLATLS
DEG_APCC_DBOX_1
0.2778
p.P330S
NCI-SNU-1
stomach
COSMIC
TRVLLATLS
DEG_APCC_DBOX_1
0.2778
p.R335C
SIDM00901
Endometrial Carcinoma
GDSC
TRVLLATLS
DEG_APCC_DBOX_1
0.1389
p.R335C
ACH-000940
Endometrial/Uterine Cancer
CCLE
TRVLLATLS
DEG_APCC_DBOX_1
0.1389
p.R335C
AN3-CA
endometrium
COSMIC
TRVLLATLS
DEG_APCC_DBOX_1
0.1389
Drug responses associated with EIF3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRVLLATLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14152
Eukaryotic translation initiation factor 3 subunit A
DEG_APCC_DBOX_1
320:328
TRVLLATLS
APC,CDC20,FZR1
0.8129
More...