DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRVQLQPMK
Uniprot ID:
Q9NQU5
Source protein:
Serine/threonine-protein kinase PAK 6
Source gene:
PAK6
Class:
DEG_APCC_DBOX_1
Location:
60:68
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5713
ASA_SCORE:
83.1111
COIL:
0.5427
CONS_SCORE:
0.2644
DSS_SCORE:
0.3831
HELIX:
0.0832
FCONS_SCORE:
0.8187
RIG_SCORE:
0.8047
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R72L
TCGA-28-5211
GBM
TCGA
TRVQLQPMK
DEG_APCC_DBOX_1
0.2222
p.R72L
DO11016
GBM
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.2222
p.S57L
TCGA-A5-A0G2
UCEC
TCGA
TRVQLQPMK
DEG_APCC_DBOX_1
0.25
p.S57L
TCGA-VQ-A91K
STAD
TCGA
TRVQLQPMK
DEG_APCC_DBOX_1
0.25
p.S57L
DO51785
STAD
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.25
p.S57L
DO41235
UCEC
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.25
p.A75T
TCGA-AA-A01P
COAD
TCGA
TRVQLQPMK
DEG_APCC_DBOX_1
0.1389
p.A75T
DO8642
COAD
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1389
p.R72W
TCGA-BR-6452
STAD
TCGA
TRVQLQPMK
DEG_APCC_DBOX_1
0.2222
p.R72W
DO38404
STAD
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.2222
p.P52L
TCGA-DA-A1I5
SKCM
TCGA
TRVQLQPMK
DEG_APCC_DBOX_1
0.1111
p.P52L
DO37447
SKCM
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1111
p.V53M
TCGA-F7-A624
HNSC
TCGA
TRVQLQPMK
DEG_APCC_DBOX_1
0.1389
p.V53M
DO44440
HNSC
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1389
p.V53M
SIDM01726
Ewing's Sarcoma
GDSC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1389
p.A75V
DO222955
BTCA
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1389
p.M76V
DO229010
COCA
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1111
p.M76V
DO229016
COCA
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1111
p.M76V
DO234285
ESAD
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1111
p.M76V
DO228941
LICA
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1111
p.V53L
DO228978
LICA
ICGC
TRVQLQPMK
DEG_APCC_DBOX_1
0.1389
p.P77L
SIDM00492
Glioblastoma
GDSC
TRVQLQPMK
DEG_APCC_DBOX_1
0.0833
p.P77L
ACH-000269
Brain Cancer
CCLE
TRVQLQPMK
DEG_APCC_DBOX_1
0.0833
p.P77L
AM-38
central_nervous_system
COSMIC
TRVQLQPMK
DEG_APCC_DBOX_1
0.0833
p.V62M
ACH-000943
Colon/Colorectal Cancer
CCLE
TRVQLQPMK
DEG_APCC_DBOX_1
0.6097
Drug responses associated with PAK6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRVQLQPMK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQU5
Serine/threonine-protein kinase PAK 6
DEG_APCC_DBOX_1
60:68
TRVQLQPMK
APC,CDC20,FZR1
0.5713
More...