DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSDCTPEK
Uniprot ID:
Q12852
Source protein:
Mitogen-activated protein kinase kinase kinase 12
Source gene:
MAP3K12
Class:
DEG_SCF_SKP2-CKS1_1
Location:
33:40
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9887
ASA_SCORE:
85.225
COIL:
0.8778
CONS_SCORE:
0.2843
DSS_SCORE:
0.6616
HELIX:
0.0751
FCONS_SCORE:
1.0772
RIG_SCORE:
0.6977
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E39K
TCGA-20-1686
OV
TCGA
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.591
p.E39K
DO31380
OV
ICGC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.591
p.Q46R
TCGA-A5-A1OF
UCEC
TCGA
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.Q46R
DO42568
UCEC
ICGC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.R27H
TCGA-EO-A22U
UCEC
TCGA
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.R27H
DO43755
UCEC
ICGC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.A24T
DO233101
GACA
ICGC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.0833
p.D30E
DO229018
LICA
ICGC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.25
p.R27S
DO229028
LICA
ICGC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.P31Q
DO229035
LICA
ICGC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.2778
p.R27C
SIDM01123
Prostate Carcinoma
GDSC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.R27C
ACH-000177
Prostate Cancer
CCLE
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.R27C
NCI-H660
prostate
COSMIC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.Q46H
SIDM01007
T-Lymphoblastic Leukemia
GDSC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.Q46H
ACH-002256
Leukemia
CCLE
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.Q46H
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.1667
p.L29M
SIDM00293
Small Cell Lung Carcinoma
GDSC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.2222
p.L29M
ACH-002052
Lung Cancer
CCLE
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.2222
p.L29M
LU-139
lung
COSMIC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.2222
p.D41V
SIDM00980
Gastric Carcinoma
GDSC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.3056
p.D41V
ACH-000948
Gastric Cancer
CCLE
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.3056
p.D41V
23132-87
stomach
COSMIC
TSDCTPEK
DEG_SCF_SKP2-CKS1_1
0.3056
Drug responses associated with MAP3K12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TSDCTPEK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12852
Mitogen-activated protein kinase kinase kinase 12
DEG_SCF_SKP2-CKS1_1
33:40
TSDCTPEK
SKP2,CSK1
0.9887
More...