DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSFELVKVPDP
Uniprot ID:
Q8NEB9
Source protein:
Phosphatidylinositol 3-kinase catalytic subunit type 3
Source gene:
PIK3C3
Class:
DEG_COP1_1
Location:
248:258
E3 ligase:
COP1
DEGRON score:
0.9734
ASA_SCORE:
49.1909
COIL:
0.6497
CONS_SCORE:
0.4281
DSS_SCORE:
0.4223
HELIX:
0.0899
FCONS_SCORE:
0.9631
RIG_SCORE:
0.8014
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P256T
TCGA-C5-A8YQ
CESC
TCGA
TSFELVKVPDP
DEG_COP1_1
0.7031
p.E251K
TCGA-CD-A489
STAD
TCGA
TSFELVKVPDP
DEG_COP1_1
0.7022
p.P258L
TCGA-DA-A95Y
SKCM
TCGA
TSFELVKVPDP
DEG_COP1_1
0.6471
p.P245L
TCGA-EE-A20C
SKCM
TCGA
TSFELVKVPDP
DEG_COP1_1
0.25
p.E263D
TCGA-EY-A1GI
UCEC
TCGA
TSFELVKVPDP
DEG_COP1_1
0.1944
p.E263D
DO41211
UCEC
ICGC
TSFELVKVPDP
DEG_COP1_1
0.1944
p.E263D
SIDM01611
Endometrial Carcinoma
GDSC
TSFELVKVPDP
DEG_COP1_1
0.1944
p.E263D
ACH-000996
Endometrial/Uterine Cancer
CCLE
TSFELVKVPDP
DEG_COP1_1
0.1944
p.D239E
TCGA-N5-A59E
UCS
TCGA
TSFELVKVPDP
DEG_COP1_1
0.0833
p.G240D
SIDM00282
Colorectal Carcinoma
GDSC
TSFELVKVPDP
DEG_COP1_1
0.1111
p.G240D
ACH-000998
Colon/Colorectal Cancer
CCLE
TSFELVKVPDP
DEG_COP1_1
0.1111
p.G240D
CW-2
large_intestine
COSMIC
TSFELVKVPDP
DEG_COP1_1
0.1111
p.M260T
SIDM00100
Mesothelioma
GDSC
TSFELVKVPDP
DEG_COP1_1
0.2778
p.M260T
ACH-002127
Lung Cancer
CCLE
TSFELVKVPDP
DEG_COP1_1
0.2778
p.M260T
H2595
pleura
COSMIC
TSFELVKVPDP
DEG_COP1_1
0.2778
p.K254E
SIDM00415
B-Cell Non-Hodgkin's Lymphoma
GDSC
TSFELVKVPDP
DEG_COP1_1
0.591
p.K254E
ROS-50
haematopoietic_and_lymphoid_tissue
COSMIC
TSFELVKVPDP
DEG_COP1_1
0.591
p.S249R
SIDM01611
Endometrial Carcinoma
GDSC
TSFELVKVPDP
DEG_COP1_1
0.7427
p.S249R
ACH-000996
Endometrial/Uterine Cancer
CCLE
TSFELVKVPDP
DEG_COP1_1
0.7427
p.E264G
ETK-1
biliary_tract
COSMIC
TSFELVKVPDP
DEG_COP1_1
0.1667
Drug responses associated with PIK3C3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TSFELVKVPDP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEB9
Phosphatidylinositol 3-kinase catalytic subunit type 3
DEG_COP1_1
248:258
TSFELVKVPDP
COP1
0.9734
More...