DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSIYPVPSL
Uniprot ID:
Q8TF72
Source protein:
Protein Shroom3
Source gene:
SHROOM3
Class:
DEG_COP1_1
Location:
465:473
E3 ligase:
COP1
DEGRON score:
0.8308
ASA_SCORE:
88.9333
COIL:
0.9238
CONS_SCORE:
0.3145
DSS_SCORE:
0.4856
HELIX:
0.0232
FCONS_SCORE:
0.8001
RIG_SCORE:
0.7066
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P471L
TCGA-3N-A9WD
SKCM
TCGA
TSIYPVPSL
DEG_COP1_1
0.7582
p.P471L
DO51235
SKCM
ICGC
TSIYPVPSL
DEG_COP1_1
0.7582
p.E474Q
TCGA-AC-A23H
BRCA
TCGA
TSIYPVPSL
DEG_COP1_1
0.3056
p.E474Q
DO2401
BRCA
ICGC
TSIYPVPSL
DEG_COP1_1
0.3056
p.A478S
TCGA-VS-A9V5
CESC
TCGA
TSIYPVPSL
DEG_COP1_1
0.1944
p.A478S
DO51650
CESC
ICGC
TSIYPVPSL
DEG_COP1_1
0.1944
p.P469A
DO230334
COCA
ICGC
TSIYPVPSL
DEG_COP1_1
0.6392
p.P469A
DO229010
COCA
ICGC
TSIYPVPSL
DEG_COP1_1
0.6392
p.P469A
DO230659
LAML
ICGC
TSIYPVPSL
DEG_COP1_1
0.6392
p.P469A
DO231140
LAML
ICGC
TSIYPVPSL
DEG_COP1_1
0.6392
p.P469A
DO228941
LICA
ICGC
TSIYPVPSL
DEG_COP1_1
0.6392
p.P469A
DO230545
LUSC
ICGC
TSIYPVPSL
DEG_COP1_1
0.6392
p.P469A
DO231207
LUSC
ICGC
TSIYPVPSL
DEG_COP1_1
0.6392
p.P469L
DO52676
MALY
ICGC
TSIYPVPSL
DEG_COP1_1
0.6471
p.V480M
ACH-000185
Non-Cancerous
CCLE
TSIYPVPSL
DEG_COP1_1
0.1389
p.Q457K
ACH-001518
Endometrial/Uterine Cancer
CCLE
TSIYPVPSL
DEG_COP1_1
0.1111
Drug responses associated with SHROOM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TSIYPVPSL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TF72
Protein Shroom3
DEG_COP1_1
465:473
TSIYPVPSL
COP1
0.8308
More...