DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSLDNPVPSP
Uniprot ID:
Q6WKZ4
Source protein:
Rab11 family-interacting protein 1
Source gene:
RAB11FIP1
Class:
DEG_COP1_1
Location:
1089:1098
E3 ligase:
COP1
DEGRON score:
0.9692
ASA_SCORE:
93.57
COIL:
0.9603
CONS_SCORE:
0.3961
DSS_SCORE:
0.794
HELIX:
0.0219
FCONS_SCORE:
1.3303
RIG_SCORE:
0.5291
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1092V
TCGA-CN-4741
HNSC
TCGA
TSLDNPVPSP
DEG_COP1_1
0.7785
p.D1092V
DO14313
HNSC
ICGC
TSLDNPVPSP
DEG_COP1_1
0.7785
p.D1092H
SIDM00040
Gastric Carcinoma
GDSC
TSLDNPVPSP
DEG_COP1_1
0.7688
p.D1092H
SIDM00171
Colorectal Carcinoma
GDSC
TSLDNPVPSP
DEG_COP1_1
0.7688
p.D1092H
TMK-1
stomach
COSMIC
TSLDNPVPSP
DEG_COP1_1
0.7688
p.P1096T
DO229025
LICA
ICGC
TSLDNPVPSP
DEG_COP1_1
0.7031
p.L1091P
SIDM00422
Hodgkin's Lymphoma
GDSC
TSLDNPVPSP
DEG_COP1_1
0.6471
p.L1091P
ACH-001203
Lymphoma
CCLE
TSLDNPVPSP
DEG_COP1_1
0.6471
p.L1091P
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
TSLDNPVPSP
DEG_COP1_1
0.6471
p.D1092E
DO229045
LICA
ICGC
TSLDNPVPSP
DEG_COP1_1
0.5647
p.S1099F
TCGA-AA-3663
COAD
TCGA
TSLDNPVPSP
DEG_COP1_1
0.3056
p.S1099F
DO9346
COAD
ICGC
TSLDNPVPSP
DEG_COP1_1
0.3056
p.P1087A
TCGA-IZ-A6M8
KIRP
TCGA
TSLDNPVPSP
DEG_COP1_1
0.2778
p.P1087A
DO48489
KIRP
ICGC
TSLDNPVPSP
DEG_COP1_1
0.2778
p.P1085L
SIDM02050
Colorectal Carcinoma
GDSC
TSLDNPVPSP
DEG_COP1_1
0.2222
p.S1084R
DO224855
BRCA
ICGC
TSLDNPVPSP
DEG_COP1_1
0.1944
p.P1083S
TCGA-B5-A3FC
UCEC
TCGA
TSLDNPVPSP
DEG_COP1_1
0.1667
p.P1083S
DO41871
UCEC
ICGC
TSLDNPVPSP
DEG_COP1_1
0.1667
p.P1083Q
TCGA-DU-5854
LGG
TCGA
TSLDNPVPSP
DEG_COP1_1
0.1667
p.P1083Q
DO22466
LGG
ICGC
TSLDNPVPSP
DEG_COP1_1
0.1667
p.P1083L
SIDM01113
Other Sarcomas
GDSC
TSLDNPVPSP
DEG_COP1_1
0.1667
p.S1082N
TCGA-DF-A2KU
UCEC
TCGA
TSLDNPVPSP
DEG_COP1_1
0.1389
p.S1082N
DO223286
UCEC
ICGC
TSLDNPVPSP
DEG_COP1_1
0.1389
Showing 1 to 23 of 23 entries
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Drug responses associated with RAB11FIP1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of TSLDNPVPSP
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6WKZ4
Rab11 family-interacting protein 1
DEG_COP1_1
1089:1098
TSLDNPVPSP
COP1
0.9692
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