DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSLDNPVPSP
Uniprot ID:
Q6WKZ4
Source protein:
Rab11 family-interacting protein 1
Source gene:
RAB11FIP1
Class:
DEG_COP1_1
Location:
1089:1098
E3 ligase:
COP1
DEGRON score:
0.9692
ASA_SCORE:
93.57
COIL:
0.9603
CONS_SCORE:
0.3961
DSS_SCORE:
0.794
HELIX:
0.0219
FCONS_SCORE:
1.3303
RIG_SCORE:
0.5291
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1099F
TCGA-AA-3663
COAD
TCGA
TSLDNPVPSP
DEG_COP1_1
0.3056
p.S1099F
DO9346
COAD
ICGC
TSLDNPVPSP
DEG_COP1_1
0.3056
p.P1083S
TCGA-B5-A3FC
UCEC
TCGA
TSLDNPVPSP
DEG_COP1_1
0.1667
p.P1083S
DO41871
UCEC
ICGC
TSLDNPVPSP
DEG_COP1_1
0.1667
p.D1092V
TCGA-CN-4741
HNSC
TCGA
TSLDNPVPSP
DEG_COP1_1
0.7785
p.D1092V
DO14313
HNSC
ICGC
TSLDNPVPSP
DEG_COP1_1
0.7785
p.S1082N
TCGA-DF-A2KU
UCEC
TCGA
TSLDNPVPSP
DEG_COP1_1
0.1389
p.S1082N
DO223286
UCEC
ICGC
TSLDNPVPSP
DEG_COP1_1
0.1389
p.P1083Q
TCGA-DU-5854
LGG
TCGA
TSLDNPVPSP
DEG_COP1_1
0.1667
p.P1083Q
DO22466
LGG
ICGC
TSLDNPVPSP
DEG_COP1_1
0.1667
p.P1087A
TCGA-IZ-A6M8
KIRP
TCGA
TSLDNPVPSP
DEG_COP1_1
0.2778
p.P1087A
DO48489
KIRP
ICGC
TSLDNPVPSP
DEG_COP1_1
0.2778
p.S1084R
DO224855
BRCA
ICGC
TSLDNPVPSP
DEG_COP1_1
0.1944
p.P1096T
DO229025
LICA
ICGC
TSLDNPVPSP
DEG_COP1_1
0.7031
p.D1092E
DO229045
LICA
ICGC
TSLDNPVPSP
DEG_COP1_1
0.5647
p.P1085L
SIDM02050
Colorectal Carcinoma
GDSC
TSLDNPVPSP
DEG_COP1_1
0.2222
p.L1091P
SIDM00422
Hodgkin's Lymphoma
GDSC
TSLDNPVPSP
DEG_COP1_1
0.6471
p.L1091P
ACH-001203
Lymphoma
CCLE
TSLDNPVPSP
DEG_COP1_1
0.6471
p.L1091P
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
TSLDNPVPSP
DEG_COP1_1
0.6471
p.D1092H
SIDM00040
Gastric Carcinoma
GDSC
TSLDNPVPSP
DEG_COP1_1
0.7688
p.D1092H
SIDM00171
Colorectal Carcinoma
GDSC
TSLDNPVPSP
DEG_COP1_1
0.7688
p.D1092H
TMK-1
stomach
COSMIC
TSLDNPVPSP
DEG_COP1_1
0.7688
p.P1083L
SIDM01113
Other Sarcomas
GDSC
TSLDNPVPSP
DEG_COP1_1
0.1667
Drug responses associated with RAB11FIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TSLDNPVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6WKZ4
Rab11 family-interacting protein 1
DEG_COP1_1
1089:1098
TSLDNPVPSP
COP1
0.9692
More...