DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSLLSKPAVPTV
Uniprot ID:
Q14008
Source protein:
Cytoskeleton-associated protein 5
Source gene:
CKAP5
Class:
DEG_COP1_1
Location:
1960:1971
E3 ligase:
COP1
DEGRON score:
0.9542
ASA_SCORE:
88.7083
COIL:
0.8701
CONS_SCORE:
0.2381
DSS_SCORE:
0.5662
HELIX:
0.1014
FCONS_SCORE:
0.9883
RIG_SCORE:
0.6872
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1969S
TCGA-DA-A3F8
SKCM
TCGA
TSLLSKPAVPTV
DEG_COP1_1
0.6752
p.S1969N
DO233935
GACA
ICGC
TSLLSKPAVPTV
DEG_COP1_1
0.7069
p.L1960F
DO15479
HNSC
ICGC
TSLLSKPAVPTV
DEG_COP1_1
0.6981
p.E1965D
DO41235
UCEC
ICGC
TSLLSKPAVPTV
DEG_COP1_1
0.6758
p.R1971C
DO43755
UCEC
ICGC
TSLLSKPAVPTV
DEG_COP1_1
0.8301
p.R1971C
HT-115
large_intestine
COSMIC
TSLLSKPAVPTV
DEG_COP1_1
0.8301
p.P1969H
ACH-000816
Lung Cancer
CCLE
TSLLSKPAVPTV
DEG_COP1_1
0.7694
Drug responses associated with CKAP5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TSLLSKPAVPTV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14008
Cytoskeleton-associated protein 5
DEG_COP1_1
1960:1971
TSLLSKPAVPTV
COP1
0.9542
More...