DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSPTPNPVPSV
Uniprot ID:
P51610
Source protein:
Host cell factor 1
Source gene:
HCFC1
Class:
DEG_COP1_1
Location:
410:420
E3 ligase:
COP1
DEGRON score:
0.8597
ASA_SCORE:
96.2
COIL:
0.9723
CONS_SCORE:
0.4889
DSS_SCORE:
0.6034
HELIX:
0.007
FCONS_SCORE:
1.0645
RIG_SCORE:
0.5897
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T405K
TCGA-AR-A256
BRCA
TCGA
TSPTPNPVPSV
DEG_COP1_1
0.1944
p.T405K
DO4155
BRCA
ICGC
TSPTPNPVPSV
DEG_COP1_1
0.1944
p.P416R
TCGA-DU-A5TU
LGG
TCGA
TSPTPNPVPSV
DEG_COP1_1
0.6401
p.P416R
DO44579
LGG
ICGC
TSPTPNPVPSV
DEG_COP1_1
0.6401
p.P416T
TCGA-EB-A553
SKCM
TCGA
TSPTPNPVPSV
DEG_COP1_1
0.5919
p.P416T
DO47329
SKCM
ICGC
TSPTPNPVPSV
DEG_COP1_1
0.5919
p.A429D
DO229031
LICA
ICGC
TSPTPNPVPSV
DEG_COP1_1
0.0833
p.A429D
DO229008
LICA
ICGC
TSPTPNPVPSV
DEG_COP1_1
0.0833
p.S411F
DO229058
LICA
ICGC
TSPTPNPVPSV
DEG_COP1_1
0.7982
p.A406D
DO229006
LICA
ICGC
TSPTPNPVPSV
DEG_COP1_1
0.2222
p.P421S
DO229213
THCA
ICGC
TSPTPNPVPSV
DEG_COP1_1
0.3056
p.P428S
SIDM00217
Colorectal Carcinoma
GDSC
TSPTPNPVPSV
DEG_COP1_1
0.1111
p.P428S
ACH-000999
Colon/Colorectal Cancer
CCLE
TSPTPNPVPSV
DEG_COP1_1
0.1111
p.P428S
SNU-1040
large_intestine
COSMIC
TSPTPNPVPSV
DEG_COP1_1
0.1111
Drug responses associated with HCFC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TSPTPNPVPSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51610
Host cell factor 1
DEG_COP1_1
410:420
TSPTPNPVPSV
COP1
0.8597
More...