DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSQVSFPLVPSA
Uniprot ID:
Q5SYB0
Source protein:
FERM and PDZ domain-containing protein 1
Source gene:
FRMPD1
Class:
DEG_COP1_1
Location:
847:858
E3 ligase:
COP1
DEGRON score:
0.5524
ASA_SCORE:
82.4833
COIL:
0.8932
CONS_SCORE:
0.5138
DSS_SCORE:
0.2408
HELIX:
0.0847
FCONS_SCORE:
1.0623
RIG_SCORE:
0.7847
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R839S
TCGA-49-6743
LUAD
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.1111
p.R839S
DO26092
LUAD
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.1111
p.Q849E
TCGA-53-7624
LUAD
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.5633
p.Q849E
DO48433
BLCA
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.5633
p.Q849E
DO25058
LUAD
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.5633
p.Y846C
TCGA-BR-8372
STAD
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.75
p.Y846C
DO47873
STAD
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.75
p.D865N
TCGA-BR-8680
STAD
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.1389
p.D865N
TCGA-IB-7651
PAAD
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.1389
p.D865N
DO46657
PAAD
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.1389
p.D865N
DO47769
STAD
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.1389
p.S862C
TCGA-CZ-5460
KIRC
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.2222
p.S862C
DO17226
KIRC
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.2222
p.R838I
TCGA-D1-A17Q
UCEC
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.0833
p.R838I
TCGA-EB-A44O
SKCM
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.0833
p.R838I
DO47272
SKCM
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.0833
p.R838I
DO41903
UCEC
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.0833
p.P853T
TCGA-DA-A95Z
SKCM
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.5919
p.P853T
DO219481
SKCM
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.5919
p.L860M
TCGA-DZ-6133
KIRP
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.2778
p.L860M
DO20762
KIRP
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.2778
p.P853L
TCGA-FR-A8YC
SKCM
TCGA
TSQVSFPLVPSA
DEG_COP1_1
0.6471
p.P853L
DO50301
SKCM
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.6471
p.D865H
DO222955
BTCA
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.1389
p.P853S
DO222363
MELA
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.5641
p.V866M
DO232761
PBCA
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.1111
p.D864E
DO229216
THCA
ICGC
TSQVSFPLVPSA
DEG_COP1_1
0.1667
Drug responses associated with FRMPD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TSQVSFPLVPSA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SYB0
FERM and PDZ domain-containing protein 1
DEG_COP1_1
847:858
TSQVSFPLVPSA
COP1
0.5524
More...