DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSSERLVPDP
Uniprot ID:
O95243
Source protein:
Methyl-CpG-binding domain protein 4
Source gene:
MBD4
Class:
DEG_COP1_1
Location:
21:30
E3 ligase:
COP1
DEGRON score:
0.9856
ASA_SCORE:
87.51
COIL:
0.8708
CONS_SCORE:
0.3158
DSS_SCORE:
0.6887
HELIX:
0.1031
FCONS_SCORE:
1.0908
RIG_SCORE:
0.6724
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T21A
TCGA-AX-A0J0
UCEC
TCGA
TSSERLVPDP
DEG_COP1_1
0.7139
p.T21A
DO41133
UCEC
ICGC
TSSERLVPDP
DEG_COP1_1
0.7139
p.V20I
TCGA-EW-A1IZ
BRCA
TCGA
TSSERLVPDP
DEG_COP1_1
0.3056
p.V20I
DO2937
BRCA
ICGC
TSSERLVPDP
DEG_COP1_1
0.3056
p.G12W
DO234219
ESAD
ICGC
TSSERLVPDP
DEG_COP1_1
0.0833
Drug responses associated with MBD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TSSERLVPDP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95243
Methyl-CpG-binding domain protein 4
DEG_COP1_1
21:30
TSSERLVPDP
COP1
0.9856
More...