DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TSSERLVPDP
Uniprot ID:
O95243
Source protein:
Methyl-CpG-binding domain protein 4
Source gene:
MBD4
Class:
DEG_COP1_1
Location:
21:30
E3 ligase:
COP1
DEGRON score:
0.9856
ASA_SCORE:
87.51
COIL:
0.8708
CONS_SCORE:
0.3158
DSS_SCORE:
0.6887
HELIX:
0.1031
FCONS_SCORE:
1.0908
RIG_SCORE:
0.6724
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T21A
TCGA-AX-A0J0
UCEC
TCGA
TSSERLVPDP
DEG_COP1_1
0.7139
p.T21A
DO41133
UCEC
ICGC
TSSERLVPDP
DEG_COP1_1
0.7139
p.V20I
TCGA-EW-A1IZ
BRCA
TCGA
TSSERLVPDP
DEG_COP1_1
0.3056
p.V20I
DO2937
BRCA
ICGC
TSSERLVPDP
DEG_COP1_1
0.3056
p.G12W
DO234219
ESAD
ICGC
TSSERLVPDP
DEG_COP1_1
0.0833
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Drug responses associated with MBD4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of TSSERLVPDP
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95243
Methyl-CpG-binding domain protein 4
DEG_COP1_1
21:30
TSSERLVPDP
COP1
0.9856
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