DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TTSPVTTTVPSV
Uniprot ID:
P49848
Source protein:
Transcription initiation factor TFIID subunit 6
Source gene:
TAF6
Class:
DEG_COP1_1
Location:
567:578
E3 ligase:
COP1
DEGRON score:
0.8312
ASA_SCORE:
90.175
COIL:
0.9272
CONS_SCORE:
0.364
DSS_SCORE:
0.5078
HELIX:
0.0112
FCONS_SCORE:
0.9677
RIG_SCORE:
0.7067
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P572Q
TCGA-DX-AB2G
SARC
TCGA
TTSPVTTTVPSV
DEG_COP1_1
0.7035
p.R561L
TCGA-ER-A19P
SKCM
TCGA
TTSPVTTTVPSV
DEG_COP1_1
0.1667
p.P571S
TCGA-K4-A54R
BLCA
TCGA
TTSPVTTTVPSV
DEG_COP1_1
0.6752
p.P571S
DO48611
BLCA
ICGC
TTSPVTTTVPSV
DEG_COP1_1
0.6752
p.P566L
TCGA-XF-A9SK
BLCA
TCGA
TTSPVTTTVPSV
DEG_COP1_1
0.3056
p.G562S
DO223732
CESC
ICGC
TTSPVTTTVPSV
DEG_COP1_1
0.1944
p.T587A
DO44440
HNSC
ICGC
TTSPVTTTVPSV
DEG_COP1_1
0.0833
p.P580H
DO229027
LICA
ICGC
TTSPVTTTVPSV
DEG_COP1_1
0.2778
p.S557R
DO229006
LICA
ICGC
TTSPVTTTVPSV
DEG_COP1_1
0.0556
p.V582I
DO23782
LUAD
ICGC
TTSPVTTTVPSV
DEG_COP1_1
0.2222
p.P576H
DO37966
SKCM
ICGC
TTSPVTTTVPSV
DEG_COP1_1
0.7694
p.V578M
DO43755
UCEC
ICGC
TTSPVTTTVPSV
DEG_COP1_1
0.6097
p.A571T
A498
kidney
COSMIC
TTSPVTTTVPSV
DEG_COP1_1
0.7139
Drug responses associated with TAF6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TTSPVTTTVPSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49848
Transcription initiation factor TFIID subunit 6
DEG_COP1_1
567:578
TTSPVTTTVPSV
COP1
0.8312
More...