DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TVTPAPVPDI
Uniprot ID:
O60721
Source protein:
Sodium/potassium/calcium exchanger 1
Source gene:
SLC24A1
Class:
DEG_COP1_1
Location:
724:733
E3 ligase:
COP1
DEGRON score:
0.9959
ASA_SCORE:
75.05
COIL:
0.8161
CONS_SCORE:
0.3959
DSS_SCORE:
0.7034
HELIX:
0.0409
FCONS_SCORE:
1.0089
RIG_SCORE:
0.6738
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V730A
TCGA-AP-A0LM
UCEC
TCGA
TVTPAPVPDI
DEG_COP1_1
0.6936
p.P721S
TCGA-DF-A2KN
UCEC
TCGA
TVTPAPVPDI
DEG_COP1_1
0.25
p.E733K
DO50326
ESAD
ICGC
TVTPAPVPDI
DEG_COP1_1
0.7022
p.D728Y
DO229041
LICA
ICGC
TVTPAPVPDI
DEG_COP1_1
0.7325
p.N722K
DO231821
LINC
ICGC
TVTPAPVPDI
DEG_COP1_1
0.2778
p.A728V
SIDM00222
Mesothelioma
GDSC
TVTPAPVPDI
DEG_COP1_1
0.5825
p.A728V
MPP-89
pleura
COSMIC
TVTPAPVPDI
DEG_COP1_1
0.5825
p.T724M
SIDM00512
Non-Small Cell Lung Carcinoma
GDSC
TVTPAPVPDI
DEG_COP1_1
0.8534
p.A728P
SIDM01205
Acute Myeloid Leukemia
GDSC
TVTPAPVPDI
DEG_COP1_1
0.6392
p.A728P
SIDM01195
Acute Myeloid Leukemia
GDSC
TVTPAPVPDI
DEG_COP1_1
0.6392
p.A728P
ACH-000406
Leukemia
CCLE
TVTPAPVPDI
DEG_COP1_1
0.6392
p.A728P
ACH-002314
Leukemia
CCLE
TVTPAPVPDI
DEG_COP1_1
0.6392
p.A728P
TUR
haematopoietic_and_lymphoid_tissue
COSMIC
TVTPAPVPDI
DEG_COP1_1
0.6392
p.E731K
TC-YIK
cervix
COSMIC
TVTPAPVPDI
DEG_COP1_1
0.7022
p.N729H
HCC2998
large_intestine
COSMIC
TVTPAPVPDI
DEG_COP1_1
0.7423
Drug responses associated with SLC24A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TVTPAPVPDI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60721
Sodium/potassium/calcium exchanger 1
DEG_COP1_1
724:733
TVTPAPVPDI
COP1
0.9959
More...