DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TYGEQLVPEL
Uniprot ID:
A0AV02
Source protein:
Solute carrier family 12 member 8
Source gene:
SLC12A8
Class:
DEG_COP1_1
Location:
550:559
E3 ligase:
COP1
DEGRON score:
0.8746
ASA_SCORE:
82.76
COIL:
0.6897
CONS_SCORE:
0.1209
DSS_SCORE:
0.6049
HELIX:
0.1279
FCONS_SCORE:
0.8807
RIG_SCORE:
0.7403
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S542R
TCGA-66-2787
LUSC
TCGA
TYGEQLVPEL
DEG_COP1_1
0.1111
p.E548K
TCGA-85-A4QQ
LUSC
TCGA
TYGEQLVPEL
DEG_COP1_1
0.2778
p.Q554K
TCGA-AA-A02R
COAD
TCGA
TYGEQLVPEL
DEG_COP1_1
0.5833
p.Q554K
TCGA-AX-A05Z
UCEC
TCGA
TYGEQLVPEL
DEG_COP1_1
0.5833
p.Q554K
DO40884
UCEC
ICGC
TYGEQLVPEL
DEG_COP1_1
0.5833
p.Q562K
TCGA-D3-A2JC
SKCM
TCGA
TYGEQLVPEL
DEG_COP1_1
0.25
p.Q562K
DO47578
SKCM
ICGC
TYGEQLVPEL
DEG_COP1_1
0.25
p.Q562H
TCGA-F5-6814
READ
TCGA
TYGEQLVPEL
DEG_COP1_1
0.25
p.S540F
TCGA-K1-A3PN
SARC
TCGA
TYGEQLVPEL
DEG_COP1_1
0.0556
p.S540F
DO220185
SARC
ICGC
TYGEQLVPEL
DEG_COP1_1
0.0556
p.D569V
DO227999
COCA
ICGC
TYGEQLVPEL
DEG_COP1_1
0.0556
p.D569V
SIDM00292
Small Cell Lung Carcinoma
GDSC
TYGEQLVPEL
DEG_COP1_1
0.0556
p.D569V
SIDM00502
B-Lymphoblastic Leukemia
GDSC
TYGEQLVPEL
DEG_COP1_1
0.0556
p.D569V
SIDM01432
Kidney Carcinoma
GDSC
TYGEQLVPEL
DEG_COP1_1
0.0556
p.D569V
SIDM00162
Biliary Tract Carcinoma
GDSC
TYGEQLVPEL
DEG_COP1_1
0.0556
p.S563L
SIDM01696
Mesothelioma
GDSC
TYGEQLVPEL
DEG_COP1_1
0.2222
p.S563L
ACH-000645
Lung Cancer
CCLE
TYGEQLVPEL
DEG_COP1_1
0.2222
Drug responses associated with SLC12A8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TYGEQLVPEL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0AV02
Solute carrier family 12 member 8
DEG_COP1_1
550:559
TYGEQLVPEL
COP1
0.8746
More...