DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VAIFKD
Uniprot ID:
P78406
Source protein:
mRNA export factor RAE1
Source gene:
RAE1
Class:
LIG_APCC_ABBA_1
Location:
218:223
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6299
ASA_SCORE:
19.7333
COIL:
0.1857
CONS_SCORE:
0.5852
DSS_SCORE:
0.4092
HELIX:
0.0037
FCONS_SCORE:
1.021
RIG_SCORE:
0.845
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A219S
TCGA-A5-A0G2
UCEC
TCGA
VAIFKD
LIG_APCC_ABBA_1
0.6477
p.A219S
DO41235
UCEC
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.6477
p.K227T
TCGA-BR-8589
STAD
TCGA
VAIFKD
LIG_APCC_ABBA_1
0.6667
p.K227T
DO47813
STAD
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.6667
p.N226K
TCGA-CH-5762
PRAD
TCGA
VAIFKD
LIG_APCC_ABBA_1
0.25
p.N226K
DO36228
PRAD
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.25
p.R216W
TCGA-EO-A22R
UCEC
TCGA
VAIFKD
LIG_APCC_ABBA_1
0.2778
p.R216W
DO42713
UCEC
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.2778
p.R216Q
TCGA-EO-A3AU
UCEC
TCGA
VAIFKD
LIG_APCC_ABBA_1
0.2778
p.R216Q
DO43827
UCEC
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.2778
p.T229I
DO52456
COCA
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.6111
p.A219V
DO233935
GACA
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.5825
p.D223Y
DO228900
LICA
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.7325
p.A232S
DO228985
LICA
ICGC
VAIFKD
LIG_APCC_ABBA_1
0.0833
p.C217R
ACH-001991
Primary
CCLE
VAIFKD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with RAE1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VAIFKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78406
mRNA export factor RAE1
LIG_APCC_ABBA_1
218:223
VAIFKD
APC,CDC20,FZR1
0.6299
More...