DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VAMTPRSE
Uniprot ID:
P00734
Source protein:
Prothrombin
Source gene:
F2
Class:
DEG_SCF_FBW7_2
Location:
193:200
E3 ligase:
FBXW7
DEGRON score:
0.9257
ASA_SCORE:
70.0125
COIL:
0.6731
CONS_SCORE:
0.3709
DSS_SCORE:
0.528
HELIX:
0.0806
FCONS_SCORE:
0.9096
RIG_SCORE:
0.7104
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R198C
TCGA-24-1104
OV
TCGA
VAMTPRSE
DEG_SCF_FBW7_2
0.719
p.R198C
TCGA-DI-A1BU
UCEC
TCGA
VAMTPRSE
DEG_SCF_FBW7_2
0.719
p.R198C
DO31909
OV
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.719
p.R198C
DO42023
UCEC
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.719
p.R198C
SIDM00875
Breast Carcinoma
GDSC
VAMTPRSE
DEG_SCF_FBW7_2
0.719
p.R198C
ACH-000624
Breast Cancer
CCLE
VAMTPRSE
DEG_SCF_FBW7_2
0.719
p.R198L
TCGA-95-7043
LUAD
TCGA
VAMTPRSE
DEG_SCF_FBW7_2
0.7316
p.R198L
DO24739
LUAD
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.7316
p.G187V
TCGA-A5-A0G2
UCEC
TCGA
VAMTPRSE
DEG_SCF_FBW7_2
0.1667
p.G187V
DO41235
UCEC
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.1667
p.G201D
TCGA-D3-A1QB
SKCM
TCGA
VAMTPRSE
DEG_SCF_FBW7_2
0.3056
p.G201D
DO47573
SKCM
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.3056
p.V193E
TCGA-D3-A8GL
SKCM
TCGA
VAMTPRSE
DEG_SCF_FBW7_2
0.7693
p.V193E
DO50287
SKCM
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.7693
p.S199F
TCGA-EE-A2MS
SKCM
TCGA
VAMTPRSE
DEG_SCF_FBW7_2
0.7982
p.S199F
DO37567
SKCM
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.7982
p.G201C
TCGA-HU-A4GN
STAD
TCGA
VAMTPRSE
DEG_SCF_FBW7_2
0.3056
p.G201C
DO47833
STAD
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.3056
p.G201V
DO229036
LICA
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.3056
p.P197Q
DO229257
THCA
ICGC
VAMTPRSE
DEG_SCF_FBW7_2
0.7035
p.S202F
SIDM01175
Other Sarcomas
GDSC
VAMTPRSE
DEG_SCF_FBW7_2
0.2778
p.S202F
ACH-002309
Sarcoma
CCLE
VAMTPRSE
DEG_SCF_FBW7_2
0.2778
p.S202F
SW684
soft_tissue
COSMIC
VAMTPRSE
DEG_SCF_FBW7_2
0.2778
p.E200K
SIDM00447
B-Lymphoblastic Leukemia
GDSC
VAMTPRSE
DEG_SCF_FBW7_2
0.7022
p.D189N
SIDM00683
Prostate Carcinoma
GDSC
VAMTPRSE
DEG_SCF_FBW7_2
0.2222
p.D189N
ACH-000977
lymph_node
CCLE
VAMTPRSE
DEG_SCF_FBW7_2
0.2222
p.D189N
LNCaP-Clone-FGC
prostate
COSMIC
VAMTPRSE
DEG_SCF_FBW7_2
0.2222
p.S203N
SIDM00276
Biliary Tract Carcinoma
GDSC
VAMTPRSE
DEG_SCF_FBW7_2
0.25
p.S203N
ACH-001858
Bile Duct Cancer
CCLE
VAMTPRSE
DEG_SCF_FBW7_2
0.25
p.S203N
ACH-002237
Bile Duct Cancer
CCLE
VAMTPRSE
DEG_SCF_FBW7_2
0.25
p.S203N
ETK-1
biliary_tract
COSMIC
VAMTPRSE
DEG_SCF_FBW7_2
0.25
Drug responses associated with F2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VAMTPRSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P00734
Prothrombin
DEG_SCF_FBW7_2
193:200
VAMTPRSE
FBXW7
0.9257
More...