DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VAPHPE
Uniprot ID:
Q86YR7
Source protein:
Probable guanine nucleotide exchange factor MCF2L2
Source gene:
MCF2L2
Class:
LIG_APCC_ABBA_1
Location:
537:542
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5061
ASA_SCORE:
82.85
COIL:
0.8865
CONS_SCORE:
0.3037
DSS_SCORE:
0.6124
HELIX:
0.0452
FCONS_SCORE:
0.9649
RIG_SCORE:
0.5958
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R532P
TCGA-60-2698
LUSC
TCGA
VAPHPE
LIG_APCC_ABBA_1
0.1944
p.R532P
DO26469
LUSC
ICGC
VAPHPE
LIG_APCC_ABBA_1
0.1944
p.A538T
TCGA-DU-6392
LGG
TCGA
VAPHPE
LIG_APCC_ABBA_1
0.6028
p.A538T
DO22237
LGG
ICGC
VAPHPE
LIG_APCC_ABBA_1
0.6028
p.V548M
TCGA-E2-A14V
BRCA
TCGA
VAPHPE
LIG_APCC_ABBA_1
0.1667
p.V548M
DO3548
BRCA
ICGC
VAPHPE
LIG_APCC_ABBA_1
0.1667
p.T552I
TCGA-EB-A41B
SKCM
TCGA
VAPHPE
LIG_APCC_ABBA_1
0.0556
p.T552I
DO37611
SKCM
ICGC
VAPHPE
LIG_APCC_ABBA_1
0.0556
p.A527T
TCGA-XY-A9T9
TGCT
TCGA
VAPHPE
LIG_APCC_ABBA_1
0.0556
p.A527T
DO233259
GACA
ICGC
VAPHPE
LIG_APCC_ABBA_1
0.0556
p.P536T
DO228971
LICA
ICGC
VAPHPE
LIG_APCC_ABBA_1
0.3056
p.S544L
SIDM01175
Other Sarcomas
GDSC
VAPHPE
LIG_APCC_ABBA_1
0.2778
p.S544L
ACH-002309
Sarcoma
CCLE
VAPHPE
LIG_APCC_ABBA_1
0.2778
p.S544L
SW684
soft_tissue
COSMIC
VAPHPE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with MCF2L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VAPHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86YR7
Probable guanine nucleotide exchange factor MCF2L2
LIG_APCC_ABBA_1
537:542
VAPHPE
APC,CDC20,FZR1
0.5061
More...