DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VAPTPATE
Uniprot ID:
O14976
Source protein:
Cyclin-G-associated kinase
Source gene:
GAK
Class:
DEG_SCF_FBW7_2
Location:
1048:1055
E3 ligase:
FBXW7
DEGRON score:
0.9849
ASA_SCORE:
80.9375
COIL:
0.929
CONS_SCORE:
0.2654
DSS_SCORE:
0.5691
HELIX:
0.046
FCONS_SCORE:
0.8766
RIG_SCORE:
0.686
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1052S
TCGA-2W-A8YY
CESC
TCGA
VAPTPATE
DEG_SCF_FBW7_2
0.6752
p.P1052S
DO223732
CESC
ICGC
VAPTPATE
DEG_SCF_FBW7_2
0.6752
p.G1056D
TCGA-EE-A29M
SKCM
TCGA
VAPTPATE
DEG_SCF_FBW7_2
0.3056
p.A1049D
DO223045
ESCA
ICGC
VAPTPATE
DEG_SCF_FBW7_2
0.6682
p.T1041N
DO228952
LICA
ICGC
VAPTPATE
DEG_SCF_FBW7_2
0.1389
p.P1065T
DO229045
LICA
ICGC
VAPTPATE
DEG_SCF_FBW7_2
0.0556
p.A1045S
DO229232
THCA
ICGC
VAPTPATE
DEG_SCF_FBW7_2
0.25
p.E1042K
SIDM00779
Colorectal Carcinoma
GDSC
VAPTPATE
DEG_SCF_FBW7_2
0.1667
p.E1042K
ACH-000491
Colon/Colorectal Cancer
CCLE
VAPTPATE
DEG_SCF_FBW7_2
0.1667
p.A1045V
SIDM00621
Ewing's Sarcoma
GDSC
VAPTPATE
DEG_SCF_FBW7_2
0.25
p.A1045V
ACH-002113
Bone Cancer
CCLE
VAPTPATE
DEG_SCF_FBW7_2
0.25
p.S1060F
SIDM01085
Bladder Carcinoma
GDSC
VAPTPATE
DEG_SCF_FBW7_2
0.1944
p.S1060F
ACH-000242
Bladder Cancer
CCLE
VAPTPATE
DEG_SCF_FBW7_2
0.1944
p.S1060F
RT4
urinary_tract
COSMIC
VAPTPATE
DEG_SCF_FBW7_2
0.1944
p.A1049G
SIDM00980
Gastric Carcinoma
GDSC
VAPTPATE
DEG_SCF_FBW7_2
0.6429
p.A1049G
ACH-000948
Gastric Cancer
CCLE
VAPTPATE
DEG_SCF_FBW7_2
0.6429
Drug responses associated with GAK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VAPTPATE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14976
Cyclin-G-associated kinase
DEG_SCF_FBW7_2
1048:1055
VAPTPATE
FBXW7
0.9849
More...