DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VAPTPGPT
Uniprot ID:
Q6ZRS2
Source protein:
Helicase SRCAP
Source gene:
SRCAP
Class:
DEG_SCF_FBW7_1
Location:
1263:1270
E3 ligase:
FBXW7
DEGRON score:
0.9314
ASA_SCORE:
91.5625
COIL:
0.9706
CONS_SCORE:
0.2434
DSS_SCORE:
0.4249
HELIX:
0.0078
FCONS_SCORE:
0.8429
RIG_SCORE:
0.6246
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1261H
TCGA-E2-A14R
BRCA
TCGA
VAPTPGPT
DEG_SCF_FBW7_1
0.2778
p.Q1261H
TCGA-MN-A4N1
LUAD
TCGA
VAPTPGPT
DEG_SCF_FBW7_1
0.2778
p.Q1261H
DO3822
BRCA
ICGC
VAPTPGPT
DEG_SCF_FBW7_1
0.2778
p.Q1261H
DO45328
LUAD
ICGC
VAPTPGPT
DEG_SCF_FBW7_1
0.2778
p.P1265L
TCGA-EY-A215
UCEC
TCGA
VAPTPGPT
DEG_SCF_FBW7_1
0.6471
p.P1265L
DO42665
UCEC
ICGC
VAPTPGPT
DEG_SCF_FBW7_1
0.6471
p.P1272L
DO4611
BRCA
ICGC
VAPTPGPT
DEG_SCF_FBW7_1
0.2778
p.P1272L
DO38192
STAD
ICGC
VAPTPGPT
DEG_SCF_FBW7_1
0.2778
p.S1270F
DO228946
LICA
ICGC
VAPTPGPT
DEG_SCF_FBW7_1
0.7982
p.V1262F
DO229022
LICA
ICGC
VAPTPGPT
DEG_SCF_FBW7_1
0.3056
p.R1256Q
DO41871
UCEC
ICGC
VAPTPGPT
DEG_SCF_FBW7_1
0.1389
p.I1260V
SIDM00845
Burkitt's Lymphoma
GDSC
VAPTPGPT
DEG_SCF_FBW7_1
0.25
p.I1260V
SIDM00461
Acute Myeloid Leukemia
GDSC
VAPTPGPT
DEG_SCF_FBW7_1
0.25
p.I1260V
SIDM00946
T-Lymphoblastic Leukemia
GDSC
VAPTPGPT
DEG_SCF_FBW7_1
0.25
p.I1260V
SIDM01519
Head and Neck Carcinoma
GDSC
VAPTPGPT
DEG_SCF_FBW7_1
0.25
p.I1260V
ACH-000786
Lymphoma
CCLE
VAPTPGPT
DEG_SCF_FBW7_1
0.25
p.I1260V
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
VAPTPGPT
DEG_SCF_FBW7_1
0.25
p.G1263D
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
VAPTPGPT
DEG_SCF_FBW7_1
0.7198
p.G1263S
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
VAPTPGPT
DEG_SCF_FBW7_1
0.6993
Drug responses associated with SRCAP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VAPTPGPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZRS2
Helicase SRCAP
DEG_SCF_FBW7_1
1263:1270
VAPTPGPT
FBXW7
0.9314
More...