DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATPGDS
Uniprot ID:
Q9UQC2
Source protein:
GRB2-associated-binding protein 2
Source gene:
GAB2
Class:
DEG_SCF_FBW7_1
Location:
341:347
E3 ligase:
FBXW7
DEGRON score:
0.9907
ASA_SCORE:
76.9857
COIL:
0.9139
CONS_SCORE:
0.2846
DSS_SCORE:
0.6895
HELIX:
0.0644
FCONS_SCORE:
0.7979
RIG_SCORE:
0.6499
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T331N
TCGA-24-1551
OV
TCGA
VATPGDS
DEG_SCF_FBW7_1
0.5
p.T340S
TCGA-AP-A051
UCEC
TCGA
VATPGDS
DEG_SCF_FBW7_1
0.3056
p.A338T
TCGA-Q1-A5R1
CESC
TCGA
VATPGDS
DEG_SCF_FBW7_1
0.25
p.V344F
DO219752
CESC
ICGC
VATPGDS
DEG_SCF_FBW7_1
0.7068
p.R342I
DO223702
COAD
ICGC
VATPGDS
DEG_SCF_FBW7_1
0.8102
p.A345T
DO233156
GACA
ICGC
VATPGDS
DEG_SCF_FBW7_1
0.7139
p.N352S
DO47867
STAD
ICGC
VATPGDS
DEG_SCF_FBW7_1
0.1944
p.R351H
DO52402
UCEC
ICGC
VATPGDS
DEG_SCF_FBW7_1
0.2222
p.A356V
DO43875
UCEC
ICGC
VATPGDS
DEG_SCF_FBW7_1
0.0833
p.A346V
DO43755
UCEC
ICGC
VATPGDS
DEG_SCF_FBW7_1
0.6936
p.T340K
SIDM00386
Ewing's Sarcoma
GDSC
VATPGDS
DEG_SCF_FBW7_1
0.3056
p.T340K
ACH-000391
Bone Cancer
CCLE
VATPGDS
DEG_SCF_FBW7_1
0.3056
p.T340K
MHH-ES-1
bone
COSMIC
VATPGDS
DEG_SCF_FBW7_1
0.3056
p.P344L
SIDM01180
Hepatocellular Carcinoma
GDSC
VATPGDS
DEG_SCF_FBW7_1
0.7582
p.P344L
SIDM01691
Chronic Myelogenous Leukemia
GDSC
VATPGDS
DEG_SCF_FBW7_1
0.7582
p.T343N
ACH-000350
Colon/Colorectal Cancer
CCLE
VATPGDS
DEG_SCF_FBW7_1
0.7055
p.T353P
RL95-2
endometrium
COSMIC
VATPGDS
DEG_SCF_FBW7_1
0.1667
p.R351C
5637
urinary_tract
COSMIC
VATPGDS
DEG_SCF_FBW7_1
0.2222
p.V341A
PANC-03-27
pancreas
COSMIC
VATPGDS
DEG_SCF_FBW7_1
0.6936
Drug responses associated with GAB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATPGDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQC2
GRB2-associated-binding protein 2
DEG_SCF_FBW7_1
341:347
VATPGDS
FBXW7
0.9907
More...