DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATPPYS
Uniprot ID:
O94855
Source protein:
Protein transport protein Sec24D
Source gene:
SEC24D
Class:
DEG_SCF_FBW7_1
Location:
7:13
E3 ligase:
FBXW7
DEGRON score:
0.9896
ASA_SCORE:
87.3
COIL:
0.9631
CONS_SCORE:
0.2596
DSS_SCORE:
0.701
HELIX:
0.0169
FCONS_SCORE:
0.9882
RIG_SCORE:
0.669
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G5D
TCGA-L5-A4OO
ESCA
TCGA
VATPPYS
DEG_SCF_FBW7_1
0.2778
p.P11L
DO233947
GACA
ICGC
VATPPYS
DEG_SCF_FBW7_1
0.6471
p.P17T
DO228978
LICA
ICGC
VATPPYS
DEG_SCF_FBW7_1
0.2222
p.P17T
DO229025
LICA
ICGC
VATPPYS
DEG_SCF_FBW7_1
0.2222
p.P11Q
DO229025
LICA
ICGC
VATPPYS
DEG_SCF_FBW7_1
0.5924
p.G18R
DO228603
PRAD
ICGC
VATPPYS
DEG_SCF_FBW7_1
0.1944
p.G10R
ACH-000989
Colon/Colorectal Cancer
CCLE
VATPPYS
DEG_SCF_FBW7_1
0.7568
p.G10R
SNU-175
large_intestine
COSMIC
VATPPYS
DEG_SCF_FBW7_1
0.7568
p.S2N
ACH-001970
Metastasis
CCLE
VATPPYS
DEG_SCF_FBW7_1
0.6389
p.C18Y
HCC2998
large_intestine
COSMIC
VATPPYS
DEG_SCF_FBW7_1
0.1944
p.I9K
M14
skin
COSMIC
VATPPYS
DEG_SCF_FBW7_1
0.7531
Drug responses associated with SEC24D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATPPYS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94855
Protein transport protein Sec24D
DEG_SCF_FBW7_1
7:13
VATPPYS
FBXW7
0.9896
More...