DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATPRPE
Uniprot ID:
A7MD48
Source protein:
Serine/arginine repetitive matrix protein 4
Source gene:
SRRM4
Class:
DEG_SCF_FBW7_2
Location:
23:29
E3 ligase:
FBXW7
DEGRON score:
0.6786
ASA_SCORE:
80.6286
COIL:
0.739
CONS_SCORE:
0.9676
DSS_SCORE:
0.3062
HELIX:
0.0474
FCONS_SCORE:
1.0091
RIG_SCORE:
0.7617
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A22V
TCGA-2W-A8YY
CESC
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.3056
p.A22V
TCGA-DF-A2KU
UCEC
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.3056
p.A22V
DO223732
CESC
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.3056
p.A22V
DO223286
UCEC
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.3056
p.P26T
TCGA-66-2794
LUSC
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.7031
p.P26T
DO26683
LUSC
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.7031
p.T37M
TCGA-B5-A0K9
UCEC
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.1111
p.T37M
TCGA-DY-A1H8
READ
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.1111
p.T37M
DO37181
READ
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.1111
p.T37M
DO42097
UCEC
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.1111
p.I32N
TCGA-BR-6452
STAD
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.25
p.I32N
DO38404
STAD
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.25
p.E13Q
TCGA-DK-AA76
BLCA
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.0556
p.E13Q
DO219013
BLCA
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.0556
p.G18E
TCGA-EO-A22U
UCEC
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.1944
p.G18E
DO43755
UCEC
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.1944
p.T25N
TCGA-EW-A1OY
BRCA
TCGA
VATPRPE
DEG_SCF_FBW7_2
0.8166
p.T25N
DO2743
BRCA
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.8166
p.A24T
DO222501
COCA
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.6028
p.A34V
DO10839
ESAD
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.1944
p.T25P
DO231102
LUSC
ICGC
VATPRPE
DEG_SCF_FBW7_2
0.8142
p.A38V
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
VATPRPE
DEG_SCF_FBW7_2
0.0833
p.A38V
ACH-000914
Lymphoma
CCLE
VATPRPE
DEG_SCF_FBW7_2
0.0833
p.A38V
HT
haematopoietic_and_lymphoid_tissue
COSMIC
VATPRPE
DEG_SCF_FBW7_2
0.0833
p.R39L
ACH-000872
Lung Cancer
CCLE
VATPRPE
DEG_SCF_FBW7_2
0.0556
Drug responses associated with SRRM4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATPRPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7MD48
Serine/arginine repetitive matrix protein 4
DEG_SCF_FBW7_2
23:29
VATPRPE
FBXW7
0.6786
More...