DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATPTPS
Uniprot ID:
Q9Y6V0
Source protein:
Protein piccolo
Source gene:
PCLO
Class:
DEG_SCF_FBW7_1
Location:
3093:3099
E3 ligase:
FBXW7
DEGRON score:
0.992
ASA_SCORE:
73.5
COIL:
0.7846
CONS_SCORE:
0.5519
DSS_SCORE:
0.2893
HELIX:
0.02
FCONS_SCORE:
1.2387
RIG_SCORE:
0.7499
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S3085Y
TCGA-06-2563
GBM
TCGA
VATPTPS
DEG_SCF_FBW7_1
0.1111
p.S3085Y
DO11525
GBM
ICGC
VATPTPS
DEG_SCF_FBW7_1
0.1111
p.G3108C
TCGA-DJ-A2PX
THCA
TCGA
VATPTPS
DEG_SCF_FBW7_1
0.0833
p.G3108C
DO39683
THCA
ICGC
VATPTPS
DEG_SCF_FBW7_1
0.0833
p.P3096L
TCGA-FS-A4F0
SKCM
TCGA
VATPTPS
DEG_SCF_FBW7_1
0.7582
p.P3096L
DO37891
SKCM
ICGC
VATPTPS
DEG_SCF_FBW7_1
0.7582
p.S3092L
TCGA-IR-A3LK
CESC
TCGA
VATPTPS
DEG_SCF_FBW7_1
0.3056
p.S3092L
DO44299
CESC
ICGC
VATPTPS
DEG_SCF_FBW7_1
0.3056
p.S3091F
TCGA-YD-A9TA
SKCM
TCGA
VATPTPS
DEG_SCF_FBW7_1
0.2778
p.S3091F
DO219503
SKCM
ICGC
VATPTPS
DEG_SCF_FBW7_1
0.2778
p.S3099F
DO233289
GACA
ICGC
VATPTPS
DEG_SCF_FBW7_1
0.7982
p.P3096A
DO26469
LUSC
ICGC
VATPTPS
DEG_SCF_FBW7_1
0.7503
p.V3089A
SIDM01259
B-Lymphoblastic Leukemia
GDSC
VATPTPS
DEG_SCF_FBW7_1
0.2222
p.V3089A
ACH-001669
Leukemia
CCLE
VATPTPS
DEG_SCF_FBW7_1
0.2222
p.V3089A
ACH-002238
Leukemia
CCLE
VATPTPS
DEG_SCF_FBW7_1
0.2222
p.V3089A
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
VATPTPS
DEG_SCF_FBW7_1
0.2222
p.S3091P
SIDM01043
Other Sarcomas
GDSC
VATPTPS
DEG_SCF_FBW7_1
0.2778
p.S3091P
ESS-1
endometrium
COSMIC
VATPTPS
DEG_SCF_FBW7_1
0.2778
p.G3108V
SIDM00749
Non-Small Cell Lung Carcinoma
GDSC
VATPTPS
DEG_SCF_FBW7_1
0.0833
p.G3108V
ACH-000916
Lung Cancer
CCLE
VATPTPS
DEG_SCF_FBW7_1
0.0833
p.G3108V
NCI-H1573
lung
COSMIC
VATPTPS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with PCLO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATPTPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y6V0
Protein piccolo
DEG_SCF_FBW7_1
3093:3099
VATPTPS
FBXW7
0.992
More...