DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VCSTT
Uniprot ID:
Q9H1H9
Source protein:
Kinesin-like protein KIF13A
Source gene:
KIF13A
Class:
DEG_SPOP_SBC_1
Location:
519:523
E3 ligase:
SPOP
DEGRON score:
0.6481
ASA_SCORE:
54.04
COIL:
0.4248
CONS_SCORE:
0.4012
DSS_SCORE:
0.0909
HELIX:
0.0024
FCONS_SCORE:
0.6973
RIG_SCORE:
0.8694
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T517I
TCGA-21-1079
LUSC
TCGA
VCSTT
DEG_SPOP_SBC_1
0.2778
p.T517I
DO26846
LUSC
ICGC
VCSTT
DEG_SPOP_SBC_1
0.2778
p.L525M
TCGA-A5-A1OF
UCEC
TCGA
VCSTT
DEG_SPOP_SBC_1
0.2778
p.L525M
DO42568
UCEC
ICGC
VCSTT
DEG_SPOP_SBC_1
0.2778
p.H527N
DO229037
LICA
ICGC
VCSTT
DEG_SPOP_SBC_1
0.2222
p.R530Q
TCGA-A5-A2K5
UCEC
TCGA
VCSTT
DEG_SPOP_SBC_1
0.1389
p.R530Q
TCGA-AA-A00N
COAD
TCGA
VCSTT
DEG_SPOP_SBC_1
0.1389
p.R530Q
DO9876
COAD
ICGC
VCSTT
DEG_SPOP_SBC_1
0.1389
p.R530Q
DO41379
UCEC
ICGC
VCSTT
DEG_SPOP_SBC_1
0.1389
p.L532P
TCGA-06-0649
GBM
TCGA
VCSTT
DEG_SPOP_SBC_1
0.0833
p.L532P
DO11142
GBM
ICGC
VCSTT
DEG_SPOP_SBC_1
0.0833
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Drug responses associated with KIF13A mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VCSTT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H1H9
Kinesin-like protein KIF13A
DEG_SPOP_SBC_1
519:523
VCSTT
SPOP
0.6481
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