DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VCTPGGT
Uniprot ID:
Q53H96
Source protein:
Pyrroline-5-carboxylate reductase 3
Source gene:
PYCR3
Class:
DEG_SCF_FBW7_1
Location:
234:240
E3 ligase:
FBXW7
DEGRON score:
0.8282
ASA_SCORE:
29.2
COIL:
0.6526
CONS_SCORE:
0.7657
DSS_SCORE:
0.3031
HELIX:
0.3231
FCONS_SCORE:
1.3289
RIG_SCORE:
0.7118
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R243H
SIDM00217
Colorectal Carcinoma
GDSC
VCTPGGT
DEG_SCF_FBW7_1
0.25
p.R243H
SNU-1040
large_intestine
COSMIC
VCTPGGT
DEG_SCF_FBW7_1
0.25
p.G236C
SIDM01608
Endometrial Carcinoma
GDSC
VCTPGGT
DEG_SCF_FBW7_1
0.76
p.A240T
C-33-A
cervix
COSMIC
VCTPGGT
DEG_SCF_FBW7_1
0.7139
p.R231H
SNU-1040
large_intestine
COSMIC
VCTPGGT
DEG_SCF_FBW7_1
0.25
p.E249Q
BT-483
breast
COSMIC
VCTPGGT
DEG_SCF_FBW7_1
0.0833
p.E229Q
BT-483
breast
COSMIC
VCTPGGT
DEG_SCF_FBW7_1
0.1944
p.R234Q
SNU-407
large_intestine
COSMIC
VCTPGGT
DEG_SCF_FBW7_1
0.7329
p.L233M
AM-38
central_nervous_system
COSMIC
VCTPGGT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with PYCR3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCTPGGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53H96
Pyrroline-5-carboxylate reductase 3
DEG_SCF_FBW7_1
234:240
VCTPGGT
FBXW7
0.8282
More...