DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VCTST
Uniprot ID:
P20333
Source protein:
Tumor necrosis factor receptor superfamily member 1B
Source gene:
TNFRSF1B
Class:
DEG_SPOP_SBC_1
Location:
199:203
E3 ligase:
SPOP
DEGRON score:
0.995
ASA_SCORE:
55.76
COIL:
0.744
CONS_SCORE:
0.5205
DSS_SCORE:
0.49
HELIX:
0.112
FCONS_SCORE:
1.284
RIG_SCORE:
0.7372
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A213P
TCGA-CU-A0YN
BLCA
TCGA
VCTST
DEG_SPOP_SBC_1
0.0556
p.A213P
DO488
BLCA
ICGC
VCTST
DEG_SPOP_SBC_1
0.0556
p.G212W
TCGA-D3-A2JG
SKCM
TCGA
VCTST
DEG_SPOP_SBC_1
0.0833
p.G212W
DO47613
SKCM
ICGC
VCTST
DEG_SPOP_SBC_1
0.0833
p.M196R
DO230334
COCA
ICGC
VCTST
DEG_SPOP_SBC_1
0.25
p.M196R
DO229003
COCA
ICGC
VCTST
DEG_SPOP_SBC_1
0.25
p.M196R
DO229346
LAML
ICGC
VCTST
DEG_SPOP_SBC_1
0.25
p.M196R
DO230659
LAML
ICGC
VCTST
DEG_SPOP_SBC_1
0.25
p.M196R
DO228947
LICA
ICGC
VCTST
DEG_SPOP_SBC_1
0.25
p.M196R
DO230937
LUSC
ICGC
VCTST
DEG_SPOP_SBC_1
0.25
Drug responses associated with TNFRSF1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20333
Tumor necrosis factor receptor superfamily member 1B
DEG_SPOP_SBC_1
199:203
VCTST
SPOP
0.995
More...