DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VDLFRE
Uniprot ID:
Q96BZ8
Source protein:
Leukocyte receptor cluster member 1
Source gene:
LENG1
Class:
LIG_APCC_ABBA_1
Location:
76:81
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9173
ASA_SCORE:
72.6833
COIL:
0.4303
CONS_SCORE:
0.6482
DSS_SCORE:
0.5123
HELIX:
0.5253
FCONS_SCORE:
1.2569
RIG_SCORE:
0.7844
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G88V
TCGA-98-A53I
LUSC
TCGA
VDLFRE
LIG_APCC_ABBA_1
0.1389
p.G88V
DO219182
LUSC
ICGC
VDLFRE
LIG_APCC_ABBA_1
0.1389
p.G74D
TCGA-AB-2806
LAML
TCGA
VDLFRE
LIG_APCC_ABBA_1
0.2778
p.G74D
DO21283
LAML
ICGC
VDLFRE
LIG_APCC_ABBA_1
0.2778
p.E67K
TCGA-AC-A6IV
BRCA
TCGA
VDLFRE
LIG_APCC_ABBA_1
0.0833
p.E67K
DO44246
BRCA
ICGC
VDLFRE
LIG_APCC_ABBA_1
0.0833
p.R80W
TCGA-C5-A8XH
CESC
TCGA
VDLFRE
LIG_APCC_ABBA_1
0.7523
p.R80W
DO49898
CESC
ICGC
VDLFRE
LIG_APCC_ABBA_1
0.7523
p.A66T
TCGA-F1-6177
STAD
TCGA
VDLFRE
LIG_APCC_ABBA_1
0.0556
p.A66T
DO38727
STAD
ICGC
VDLFRE
LIG_APCC_ABBA_1
0.0556
p.G86R
TCGA-YF-AA3M
BLCA
TCGA
VDLFRE
LIG_APCC_ABBA_1
0.1944
p.G86R
DO51952
BLCA
ICGC
VDLFRE
LIG_APCC_ABBA_1
0.1944
p.P75H
DO233764
GACA
ICGC
VDLFRE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with LENG1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDLFRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96BZ8
Leukocyte receptor cluster member 1
LIG_APCC_ABBA_1
76:81
VDLFRE
APC,CDC20,FZR1
0.9173
More...