DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VDMFGD
Uniprot ID:
Q8TDG4
Source protein:
Helicase POLQ-like
Source gene:
HELQ
Class:
LIG_APCC_ABBA_1
Location:
105:110
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7093
ASA_SCORE:
64.9333
COIL:
0.5812
CONS_SCORE:
0.3124
DSS_SCORE:
0.5671
HELIX:
0.3085
FCONS_SCORE:
1.1178
RIG_SCORE:
0.7565
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I120V
TCGA-AO-A128
BRCA
TCGA
VDMFGD
LIG_APCC_ABBA_1
0.0556
p.I120V
DO5326
BRCA
ICGC
VDMFGD
LIG_APCC_ABBA_1
0.0556
p.D102G
TCGA-FI-A2D5
UCEC
TCGA
VDMFGD
LIG_APCC_ABBA_1
0.25
p.D102G
DO41331
UCEC
ICGC
VDMFGD
LIG_APCC_ABBA_1
0.25
p.E116G
TCGA-FS-A1ZT
SKCM
TCGA
VDMFGD
LIG_APCC_ABBA_1
0.1667
p.E116G
DO37468
SKCM
ICGC
VDMFGD
LIG_APCC_ABBA_1
0.1667
p.D112G
TCGA-HZ-8001
PAAD
TCGA
VDMFGD
LIG_APCC_ABBA_1
0.2778
p.D112G
DO32796
PAAD
ICGC
VDMFGD
LIG_APCC_ABBA_1
0.2778
p.Y111C
DO233081
GACA
ICGC
VDMFGD
LIG_APCC_ABBA_1
0.3056
p.D106E
DO229026
LICA
ICGC
VDMFGD
LIG_APCC_ABBA_1
0.5647
p.S103N
SIDM00151
Ovarian Carcinoma
GDSC
VDMFGD
LIG_APCC_ABBA_1
0.2778
p.S103N
ACH-000966
Ovarian Cancer
CCLE
VDMFGD
LIG_APCC_ABBA_1
0.2778
p.S103N
IGROV-1
ovary
COSMIC
VDMFGD
LIG_APCC_ABBA_1
0.2778
p.P100S
SIDM00068
Colorectal Carcinoma
GDSC
VDMFGD
LIG_APCC_ABBA_1
0.1944
p.P100S
GEO
large_intestine
COSMIC
VDMFGD
LIG_APCC_ABBA_1
0.1944
Drug responses associated with HELQ mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDMFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TDG4
Helicase POLQ-like
LIG_APCC_ABBA_1
105:110
VDMFGD
APC,CDC20,FZR1
0.7093
More...