DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VDVFRE
Uniprot ID:
Q06323
Source protein:
Proteasome activator complex subunit 1
Source gene:
PSME1
Class:
LIG_APCC_ABBA_1
Location:
14:19
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6345
ASA_SCORE:
58.5333
COIL:
0.0038
CONS_SCORE:
0.4586
DSS_SCORE:
0.26
HELIX:
0.996
FCONS_SCORE:
1.2861
RIG_SCORE:
0.8705
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D15Y
TCGA-43-3394
LUSC
TCGA
VDVFRE
LIG_APCC_ABBA_1
0.6214
p.D15Y
DO26596
LUSC
ICGC
VDVFRE
LIG_APCC_ABBA_1
0.6214
p.L21F
TCGA-AP-A059
UCEC
TCGA
VDVFRE
LIG_APCC_ABBA_1
0.2778
p.L21F
DO41361
UCEC
ICGC
VDVFRE
LIG_APCC_ABBA_1
0.2778
p.K24N
TCGA-EE-A181
SKCM
TCGA
VDVFRE
LIG_APCC_ABBA_1
0.6389
p.K24N
DO37444
SKCM
ICGC
VDVFRE
LIG_APCC_ABBA_1
0.6389
p.K13N
TCGA-X7-A8M8
THYM
TCGA
VDVFRE
LIG_APCC_ABBA_1
0.75
p.A12S
DO232224
PBCA
ICGC
VDVFRE
LIG_APCC_ABBA_1
0.2778
p.E19K
ACH-000975
Lung Cancer
CCLE
VDVFRE
LIG_APCC_ABBA_1
0.7022
p.G10V
CAL-78
bone
COSMIC
VDVFRE
LIG_APCC_ABBA_1
0.2222
p.T27N
MKN7
stomach
COSMIC
VDVFRE
LIG_APCC_ABBA_1
0.1111
p.L4I
639-V
urinary_tract
COSMIC
VDVFRE
LIG_APCC_ABBA_1
0.5
Drug responses associated with PSME1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDVFRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q06323
Proteasome activator complex subunit 1
LIG_APCC_ABBA_1
14:19
VDVFRE
APC,CDC20,FZR1
0.6345
More...