DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VEERTPTK
Uniprot ID:
Q96T58
Source protein:
Msx2-interacting protein
Source gene:
SPEN
Class:
DEG_SCF_SKP2-CKS1_1
Location:
2417:2424
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9334
ASA_SCORE:
121.575
COIL:
0.94
CONS_SCORE:
0.3339
DSS_SCORE:
0.757
HELIX:
0.0365
FCONS_SCORE:
0.9168
RIG_SCORE:
0.6087
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2411L
TCGA-AJ-A3EL
UCEC
TCGA
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.6111
p.S2411L
TCGA-EO-A22R
UCEC
TCGA
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.6111
p.S2411L
TCGA-FR-A726
SKCM
TCGA
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.6111
p.S2411L
DO48665
SKCM
ICGC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.6111
p.S2411L
DO41542
UCEC
ICGC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.6111
p.S2411L
DO42713
UCEC
ICGC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.6111
p.P2428S
TCGA-CV-7568
HNSC
TCGA
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2222
p.P2428S
DO14160
HNSC
ICGC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2222
p.S2426Y
TCGA-EO-A3KX
UCEC
TCGA
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2778
p.S2426Y
DO219774
UCEC
ICGC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2778
p.S2426T
DO223141
ESCA
ICGC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2778
p.P2428T
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2222
p.P2428T
ACH-002256
Leukemia
CCLE
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2222
p.P2428T
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2222
p.P2434L
SIDM01041
Esophageal Carcinoma
GDSC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.0556
p.P2434L
ACH-001500
Esophageal Cancer
CCLE
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.0556
p.P2434L
FLO-1
oesophagus
COSMIC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.0556
p.S2426F
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
VEERTPTK
DEG_SCF_SKP2-CKS1_1
0.2778
Drug responses associated with SPEN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VEERTPTK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96T58
Msx2-interacting protein
DEG_SCF_SKP2-CKS1_1
2417:2424
VEERTPTK
SKP2,CSK1
0.9334
More...