DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VELYNE
Uniprot ID:
P51149
Source protein:
Ras-related protein Rab-7a
Source gene:
RAB7A
Class:
LIG_APCC_ABBA_1
Location:
180:185
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8807
ASA_SCORE:
97.05
COIL:
0.5318
CONS_SCORE:
0.3721
DSS_SCORE:
0.3729
HELIX:
0.4445
FCONS_SCORE:
0.7213
RIG_SCORE:
0.826
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E185K
TCGA-B5-A11E
UCEC
TCGA
VELYNE
LIG_APCC_ABBA_1
0.7022
p.E185K
TCGA-EI-6917
READ
TCGA
VELYNE
LIG_APCC_ABBA_1
0.7022
p.E185K
DO36881
READ
ICGC
VELYNE
LIG_APCC_ABBA_1
0.7022
p.E185K
DO41644
UCEC
ICGC
VELYNE
LIG_APCC_ABBA_1
0.7022
p.I190V
DO222874
COCA
ICGC
VELYNE
LIG_APCC_ABBA_1
0.1944
p.T178M
DO234199
ESAD
ICGC
VELYNE
LIG_APCC_ABBA_1
0.7222
p.E179D
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VELYNE
LIG_APCC_ABBA_1
0.3056
p.E179D
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VELYNE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with RAB7A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VELYNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51149
Ras-related protein Rab-7a
LIG_APCC_ABBA_1
180:185
VELYNE
APC,CDC20,FZR1
0.8807
More...