DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VEPYPD
Uniprot ID:
Q8TBK2
Source protein:
N-lysine methyltransferase SETD6
Source gene:
SETD6
Class:
LIG_APCC_ABBA_1
Location:
300:305
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9787
ASA_SCORE:
69.0833
COIL:
0.805
CONS_SCORE:
0.4644
DSS_SCORE:
0.3044
HELIX:
0.0162
FCONS_SCORE:
0.8046
RIG_SCORE:
0.7786
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M296T
TCGA-32-1982
GBM
TCGA
VEPYPD
LIG_APCC_ABBA_1
0.2222
p.N306S
TCGA-CV-7104
HNSC
TCGA
VEPYPD
LIG_APCC_ABBA_1
0.3056
p.P302Q
TCGA-D3-A3CE
SKCM
TCGA
VEPYPD
LIG_APCC_ABBA_1
0.7035
p.P302Q
TCGA-FS-A1ZB
SKCM
TCGA
VEPYPD
LIG_APCC_ABBA_1
0.7035
p.H309N
DO225223
BRCA
ICGC
VEPYPD
LIG_APCC_ABBA_1
0.2222
p.R295C
DO7783
COAD
ICGC
VEPYPD
LIG_APCC_ABBA_1
0.1944
p.R295C
ACH-001182
Unknown
CCLE
VEPYPD
LIG_APCC_ABBA_1
0.1944
p.R295C
RPMI-6666
haematopoietic_and_lymphoid_tissue
COSMIC
VEPYPD
LIG_APCC_ABBA_1
0.1944
p.R295H
DO234260
ESAD
ICGC
VEPYPD
LIG_APCC_ABBA_1
0.1944
p.L299V
DO23168
LINC
ICGC
VEPYPD
LIG_APCC_ABBA_1
0.3056
p.R314C
DO41584
UCEC
ICGC
VEPYPD
LIG_APCC_ABBA_1
0.0833
p.R314H
DO41109
UCEC
ICGC
VEPYPD
LIG_APCC_ABBA_1
0.0833
p.H295D
MZ2-MEL
skin
COSMIC
VEPYPD
LIG_APCC_ABBA_1
0.1944
p.E291A
SNU-175
large_intestine
COSMIC
VEPYPD
LIG_APCC_ABBA_1
0.0833
p.E296Q
LXF-289
lung
COSMIC
VEPYPD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with SETD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VEPYPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TBK2
N-lysine methyltransferase SETD6
LIG_APCC_ABBA_1
300:305
VEPYPD
APC,CDC20,FZR1
0.9787
More...