DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VERTPLPS
Uniprot ID:
O43347
Source protein:
RNA-binding protein Musashi homolog 1
Source gene:
MSI1
Class:
DEG_SCF_FBW7_1
Location:
248:255
E3 ligase:
FBXW7
DEGRON score:
0.9142
ASA_SCORE:
26.425
COIL:
0.8994
CONS_SCORE:
0.3153
DSS_SCORE:
0.3044
HELIX:
0.0496
FCONS_SCORE:
0.8374
RIG_SCORE:
0.7793
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A264V
TCGA-85-A4QR
LUSC
TCGA
VERTPLPS
DEG_SCF_FBW7_1
0.0833
p.A264V
DO45523
LUSC
ICGC
VERTPLPS
DEG_SCF_FBW7_1
0.0833
p.A264T
TCGA-B5-A1MX
UCEC
TCGA
VERTPLPS
DEG_SCF_FBW7_1
0.0833
p.A264T
DO41999
UCEC
ICGC
VERTPLPS
DEG_SCF_FBW7_1
0.0833
p.P254Q
TCGA-ER-A19P
SKCM
TCGA
VERTPLPS
DEG_SCF_FBW7_1
0.5924
p.P254Q
TCGA-P3-A6T3
HNSC
TCGA
VERTPLPS
DEG_SCF_FBW7_1
0.5924
p.P254Q
DO49055
HNSC
ICGC
VERTPLPS
DEG_SCF_FBW7_1
0.5924
p.P254Q
DO47623
SKCM
ICGC
VERTPLPS
DEG_SCF_FBW7_1
0.5924
p.R250Q
DO230343
COCA
ICGC
VERTPLPS
DEG_SCF_FBW7_1
0.6218
p.S255R
DO231618
LINC
ICGC
VERTPLPS
DEG_SCF_FBW7_1
0.8538
p.T251S
SIDM00845
Burkitt's Lymphoma
GDSC
VERTPLPS
DEG_SCF_FBW7_1
0.8227
p.T251S
ACH-000786
Lymphoma
CCLE
VERTPLPS
DEG_SCF_FBW7_1
0.8227
p.E249D
SIDM00859
B-Cell Non-Hodgkin's Lymphoma
GDSC
VERTPLPS
DEG_SCF_FBW7_1
0.5647
p.E249D
ACH-001498
Lymphoma
CCLE
VERTPLPS
DEG_SCF_FBW7_1
0.5647
p.E249D
Farage
haematopoietic_and_lymphoid_tissue
COSMIC
VERTPLPS
DEG_SCF_FBW7_1
0.5647
Drug responses associated with MSI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VERTPLPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43347
RNA-binding protein Musashi homolog 1
DEG_SCF_FBW7_1
248:255
VERTPLPS
FBXW7
0.9142
More...