DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VETPHVT
Uniprot ID:
Q5T200
Source protein:
Zinc finger CCCH domain-containing protein 13
Source gene:
ZC3H13
Class:
DEG_SCF_FBW7_1
Location:
1168:1174
E3 ligase:
FBXW7
DEGRON score:
0.9932
ASA_SCORE:
104.9
COIL:
0.9383
CONS_SCORE:
0.3196
DSS_SCORE:
0.6461
HELIX:
0.0394
FCONS_SCORE:
0.9553
RIG_SCORE:
0.7216
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1158K
TCGA-AP-A0LM
UCEC
TCGA
VETPHVT
DEG_SCF_FBW7_1
0.0556
p.R1158K
DO43306
UCEC
ICGC
VETPHVT
DEG_SCF_FBW7_1
0.0556
p.P1183T
DO229028
LICA
ICGC
VETPHVT
DEG_SCF_FBW7_1
0.0833
p.V1173M
DO36556
READ
ICGC
VETPHVT
DEG_SCF_FBW7_1
0.6097
p.R1181H
SIDM00447
B-Lymphoblastic Leukemia
GDSC
VETPHVT
DEG_SCF_FBW7_1
0.1389
p.H1172D
SIDM00744
Non-Small Cell Lung Carcinoma
GDSC
VETPHVT
DEG_SCF_FBW7_1
0.6577
p.H1172D
ACH-000893
Lung Cancer
CCLE
VETPHVT
DEG_SCF_FBW7_1
0.6577
p.H1172D
NCI-H1651
lung
COSMIC
VETPHVT
DEG_SCF_FBW7_1
0.6577
p.E1166Q
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
VETPHVT
DEG_SCF_FBW7_1
0.2778
p.E1166Q
ACH-000945
Lung Cancer
CCLE
VETPHVT
DEG_SCF_FBW7_1
0.2778
p.E1166Q
NCI-H650
lung
COSMIC
VETPHVT
DEG_SCF_FBW7_1
0.2778
p.R1158T
ACH-001955
Bone Cancer
CCLE
VETPHVT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with ZC3H13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETPHVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T200
Zinc finger CCCH domain-containing protein 13
DEG_SCF_FBW7_1
1168:1174
VETPHVT
FBXW7
0.9932
More...