DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VETPLPS
Uniprot ID:
Q86V42
Source protein:
Protein FAM124A
Source gene:
FAM124A
Class:
DEG_SCF_FBW7_1
Location:
441:447
E3 ligase:
FBXW7
DEGRON score:
0.98
ASA_SCORE:
72.0143
COIL:
0.9199
CONS_SCORE:
0.2243
DSS_SCORE:
0.3325
HELIX:
0.0353
FCONS_SCORE:
1.0642
RIG_SCORE:
0.7035
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L454M
TCGA-44-8120
LUAD
TCGA
VETPLPS
DEG_SCF_FBW7_1
0.1389
p.L454M
DO45402
LUAD
ICGC
VETPLPS
DEG_SCF_FBW7_1
0.1389
p.L454P
TCGA-B2-4102
KIRC
TCGA
VETPLPS
DEG_SCF_FBW7_1
0.1389
p.L454P
DO18839
KIRC
ICGC
VETPLPS
DEG_SCF_FBW7_1
0.1389
p.R455Q
DO234453
ESAD
ICGC
VETPLPS
DEG_SCF_FBW7_1
0.1111
p.R455Q
DO35757
PBCA
ICGC
VETPLPS
DEG_SCF_FBW7_1
0.1111
p.R455L
DO228971
LICA
ICGC
VETPLPS
DEG_SCF_FBW7_1
0.1111
p.S438F
DO229446
SKCA
ICGC
VETPLPS
DEG_SCF_FBW7_1
0.25
p.D441N
SIDM01296
Esophageal Carcinoma
GDSC
VETPLPS
DEG_SCF_FBW7_1
0.6932
p.R455W
SIDM00611
Kidney Carcinoma
GDSC
VETPLPS
DEG_SCF_FBW7_1
0.1111
p.D440N
SIDM00193
Colorectal Carcinoma
GDSC
VETPLPS
DEG_SCF_FBW7_1
0.3056
p.D440N
SNU-81
large_intestine
COSMIC
VETPLPS
DEG_SCF_FBW7_1
0.3056
p.L454R
SIDM00653
Small Cell Lung Carcinoma
GDSC
VETPLPS
DEG_SCF_FBW7_1
0.1389
p.L454R
NCI-H1092
lung
COSMIC
VETPLPS
DEG_SCF_FBW7_1
0.1389
p.L445F
ACH-000879
Endometrial/Uterine Cancer
CCLE
VETPLPS
DEG_SCF_FBW7_1
0.587
p.L445F
MFE-296
endometrium
COSMIC
VETPLPS
DEG_SCF_FBW7_1
0.587
p.A456T
ACH-000984
Endometrial/Uterine Cancer
CCLE
VETPLPS
DEG_SCF_FBW7_1
0.0833
p.E448K
ACH-001131
Skin Cancer
CCLE
VETPLPS
DEG_SCF_FBW7_1
0.3056
p.P446L
ACH-002309
Sarcoma
CCLE
VETPLPS
DEG_SCF_FBW7_1
0.6471
p.P446L
SW684
soft_tissue
COSMIC
VETPLPS
DEG_SCF_FBW7_1
0.6471
Drug responses associated with FAM124A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETPLPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86V42
Protein FAM124A
DEG_SCF_FBW7_1
441:447
VETPLPS
FBXW7
0.98
More...