DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VFATPVLS
Uniprot ID:
P23471
Source protein:
Receptor-type tyrosine-protein phosphatase zeta
Source gene:
PTPRZ1
Class:
DEG_SCF_FBW7_1
Location:
1311:1318
E3 ligase:
FBXW7
DEGRON score:
0.9831
ASA_SCORE:
68.3375
COIL:
0.682
CONS_SCORE:
0.6304
DSS_SCORE:
0.3366
HELIX:
0.0224
FCONS_SCORE:
1.1681
RIG_SCORE:
0.7989
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I1319M
TCGA-AA-3977
COAD
TCGA
VFATPVLS
DEG_SCF_FBW7_1
0.3056
p.I1319M
DO8730
COAD
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.3056
p.P1305H
TCGA-AP-A059
UCEC
TCGA
VFATPVLS
DEG_SCF_FBW7_1
0.1667
p.P1305H
DO41361
UCEC
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.1667
p.F1312L
TCGA-CC-A7IH
LIHC
TCGA
VFATPVLS
DEG_SCF_FBW7_1
0.587
p.F1312L
DO52181
LIHC
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.587
p.V1316F
TCGA-EE-A2MF
SKCM
TCGA
VFATPVLS
DEG_SCF_FBW7_1
0.5957
p.V1316F
DO51249
SKCM
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.5957
p.P1306Q
TCGA-MP-A4T7
LUAD
TCGA
VFATPVLS
DEG_SCF_FBW7_1
0.1944
p.P1306Q
DO45370
LUAD
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.1944
p.L1323V
DO224904
BRCA
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.1944
p.V1316A
DO230347
COCA
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.5825
p.C1321R
DO48203
ESCA
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.25
p.C1321R
DO22237
LGG
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.25
p.P1322H
DO24110
LUAD
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.2222
p.AH1303AY
DO220911
MELA
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0
p.H1304Y
DO220911
MELA
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.1389
p.P1306S
DO222708
MELA
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.1944
p.D1311N
DO30260
OV
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.6932
p.V1311L
DO35424
PACA
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.5654
p.P1325Q
DO37770
SKCM
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.1389
p.E1315D
DO51763
STAD
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.6758
p.P1327L
DO47877
STAD
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.0833
p.D1302Y
DO41572
UCEC
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.0833
p.V1316G
DO42568
UCEC
ICGC
VFATPVLS
DEG_SCF_FBW7_1
0.6421
p.P1315H
SIDM00782
Colorectal Carcinoma
GDSC
VFATPVLS
DEG_SCF_FBW7_1
0.7694
p.P1315H
ACH-000381
Colon/Colorectal Cancer
CCLE
VFATPVLS
DEG_SCF_FBW7_1
0.7694
p.P1315H
T84
large_intestine
COSMIC
VFATPVLS
DEG_SCF_FBW7_1
0.7694
p.L1317I
SIDM00658
Non-Small Cell Lung Carcinoma
GDSC
VFATPVLS
DEG_SCF_FBW7_1
0.6063
p.L1317I
ACH-000852
Lung Cancer
CCLE
VFATPVLS
DEG_SCF_FBW7_1
0.6063
p.L1317I
NCI-H1435
lung
COSMIC
VFATPVLS
DEG_SCF_FBW7_1
0.6063
p.A1313S
SIDM00056
Thyroid Gland Carcinoma
GDSC
VFATPVLS
DEG_SCF_FBW7_1
0.6477
p.A1313S
ACH-002148
Thyroid Cancer
CCLE
VFATPVLS
DEG_SCF_FBW7_1
0.6477
p.A1313S
K5
thyroid
COSMIC
VFATPVLS
DEG_SCF_FBW7_1
0.6477
p.E1306Q
ACH-001619
Gallbladder Cancer
CCLE
VFATPVLS
DEG_SCF_FBW7_1
0.1944
p.E1306Q
ACH-002185
Pancreatic Cancer
CCLE
VFATPVLS
DEG_SCF_FBW7_1
0.1944
p.E1306Q
PL18
pancreas
COSMIC
VFATPVLS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with PTPRZ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFATPVLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23471
Receptor-type tyrosine-protein phosphatase zeta
DEG_SCF_FBW7_1
1311:1318
VFATPVLS
FBXW7
0.9831
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