DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VFPHAE
Uniprot ID:
Q9ULI0
Source protein:
ATPase family AAA domain-containing protein 2B
Source gene:
ATAD2B
Class:
LIG_APCC_ABBA_1
Location:
697:702
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7114
ASA_SCORE:
59.4
COIL:
0.5762
CONS_SCORE:
0.3857
DSS_SCORE:
0.1863
HELIX:
0.3437
FCONS_SCORE:
1.2524
RIG_SCORE:
0.7936
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q705H
TCGA-D3-A2JD
SKCM
TCGA
VFPHAE
LIG_APCC_ABBA_1
0.25
p.Q705H
DO37543
SKCM
ICGC
VFPHAE
LIG_APCC_ABBA_1
0.25
p.N688Y
DO227969
COCA
ICGC
VFPHAE
LIG_APCC_ABBA_1
0.0833
p.N689I
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
VFPHAE
LIG_APCC_ABBA_1
0.1111
p.N689I
ACH-000929
Lung Cancer
CCLE
VFPHAE
LIG_APCC_ABBA_1
0.1111
p.N689I
NCI-H2110
lung
COSMIC
VFPHAE
LIG_APCC_ABBA_1
0.1111
p.A701V
SIDM00217
Colorectal Carcinoma
GDSC
VFPHAE
LIG_APCC_ABBA_1
0.5825
p.A701V
ACH-000999
Colon/Colorectal Cancer
CCLE
VFPHAE
LIG_APCC_ABBA_1
0.5825
p.A701V
SNU-1040
large_intestine
COSMIC
VFPHAE
LIG_APCC_ABBA_1
0.5825
p.L691I
ACH-001664
Gastric Cancer
CCLE
VFPHAE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with ATAD2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFPHAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULI0
ATPase family AAA domain-containing protein 2B
LIG_APCC_ABBA_1
697:702
VFPHAE
APC,CDC20,FZR1
0.7114
More...