DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VFPHNE
Uniprot ID:
P56715
Source protein:
Oxygen-regulated protein 1
Source gene:
RP1
Class:
LIG_APCC_ABBA_1
Location:
801:806
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8723
ASA_SCORE:
104.9833
COIL:
0.8127
CONS_SCORE:
0.4253
DSS_SCORE:
0.4066
HELIX:
0.1387
FCONS_SCORE:
0.9779
RIG_SCORE:
0.7343
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D799N
TCGA-EE-A2MJ
SKCM
TCGA
VFPHNE
LIG_APCC_ABBA_1
0.2778
p.D799N
DO38099
SKCM
ICGC
VFPHNE
LIG_APCC_ABBA_1
0.2778
p.P803S
TCGA-FW-A3R5
SKCM
TCGA
VFPHNE
LIG_APCC_ABBA_1
0.6752
p.P803S
DO37406
SKCM
ICGC
VFPHNE
LIG_APCC_ABBA_1
0.6752
p.P803S
SIDM00890
Melanoma
GDSC
VFPHNE
LIG_APCC_ABBA_1
0.6752
p.P803S
ACH-000580
Skin Cancer
CCLE
VFPHNE
LIG_APCC_ABBA_1
0.6752
p.P803S
C32
skin
COSMIC
VFPHNE
LIG_APCC_ABBA_1
0.6752
p.E806K
TCGA-W3-AA1V
SKCM
TCGA
VFPHNE
LIG_APCC_ABBA_1
0.7022
p.E806K
DO51276
SKCM
ICGC
VFPHNE
LIG_APCC_ABBA_1
0.7022
p.I795F
DO233203
GACA
ICGC
VFPHNE
LIG_APCC_ABBA_1
0.1667
p.S812N
DO220866
MELA
ICGC
VFPHNE
LIG_APCC_ABBA_1
0.1667
p.S812I
SIDM00118
Colorectal Carcinoma
GDSC
VFPHNE
LIG_APCC_ABBA_1
0.1667
p.S812I
HCC2998
large_intestine
COSMIC
VFPHNE
LIG_APCC_ABBA_1
0.1667
p.G796D
SIDM01503
Small Cell Lung Carcinoma
GDSC
VFPHNE
LIG_APCC_ABBA_1
0.1944
p.G796D
ACH-000844
Lung Cancer
CCLE
VFPHNE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with RP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFPHNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P56715
Oxygen-regulated protein 1
LIG_APCC_ABBA_1
801:806
VFPHNE
APC,CDC20,FZR1
0.8723
More...