DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VFTPKTS
Uniprot ID:
P49792
Source protein:
E3 SUMO-protein ligase RanBP2
Source gene:
RANBP2
Class:
DEG_SCF_FBW7_1
Location:
1394:1400
E3 ligase:
FBXW7
DEGRON score:
0.5963
ASA_SCORE:
74.6
COIL:
0.859
CONS_SCORE:
0.2645
DSS_SCORE:
0.4842
HELIX:
0.0153
FCONS_SCORE:
0.949
RIG_SCORE:
0.739
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1404F
TCGA-49-4487
LUAD
TCGA
VFTPKTS
DEG_SCF_FBW7_1
0.2222
p.V1404F
DO24780
LUAD
ICGC
VFTPKTS
DEG_SCF_FBW7_1
0.2222
p.T1396I
TCGA-98-8021
LUSC
TCGA
VFTPKTS
DEG_SCF_FBW7_1
0.8189
p.T1396I
DO27468
LUSC
ICGC
VFTPKTS
DEG_SCF_FBW7_1
0.8189
p.R1407Q
TCGA-AP-A056
UCEC
TCGA
VFTPKTS
DEG_SCF_FBW7_1
0.1389
p.R1407Q
DO43971
UCEC
ICGC
VFTPKTS
DEG_SCF_FBW7_1
0.1389
p.A1409T
TCGA-EY-A215
UCEC
TCGA
VFTPKTS
DEG_SCF_FBW7_1
0.0833
p.A1409T
DO42665
UCEC
ICGC
VFTPKTS
DEG_SCF_FBW7_1
0.0833
p.P1389L
TCGA-LN-A49P
ESCA
TCGA
VFTPKTS
DEG_SCF_FBW7_1
0.1944
p.V1386F
SIDM00742
Non-Small Cell Lung Carcinoma
GDSC
VFTPKTS
DEG_SCF_FBW7_1
0.1111
p.V1386F
ACH-000021
Lung Cancer
CCLE
VFTPKTS
DEG_SCF_FBW7_1
0.1111
p.V1386F
ACH-000033
Lung Cancer
CCLE
VFTPKTS
DEG_SCF_FBW7_1
0.1111
p.V1386F
NCI-H1693
lung
COSMIC
VFTPKTS
DEG_SCF_FBW7_1
0.1111
p.V1404I
SIDM00156
Neuroblastoma
GDSC
VFTPKTS
DEG_SCF_FBW7_1
0.2222
p.V1404I
NB7
autonomic_ganglia
COSMIC
VFTPKTS
DEG_SCF_FBW7_1
0.2222
p.S1400N
SIDM00516
Melanoma
GDSC
VFTPKTS
DEG_SCF_FBW7_1
0.818
p.S1400N
ACH-002166
Skin Cancer
CCLE
VFTPKTS
DEG_SCF_FBW7_1
0.818
p.S1400N
MZ7-mel
skin
COSMIC
VFTPKTS
DEG_SCF_FBW7_1
0.818
p.S1400R
SIDM01127
Non-Small Cell Lung Carcinoma
GDSC
VFTPKTS
DEG_SCF_FBW7_1
0.8538
p.S1400R
ACH-000628
Lung Cancer
CCLE
VFTPKTS
DEG_SCF_FBW7_1
0.8538
p.S1400R
NCI-H596
lung
COSMIC
VFTPKTS
DEG_SCF_FBW7_1
0.8538
Drug responses associated with RANBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFTPKTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_SCF_FBW7_1
1394:1400
VFTPKTS
FBXW7
0.5963
More...