DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VFTPTIE
Uniprot ID:
P10586
Source protein:
Receptor-type tyrosine-protein phosphatase F
Source gene:
PTPRF
Class:
DEG_SCF_FBW7_2
Location:
592:598
E3 ligase:
FBXW7
DEGRON score:
0.9758
ASA_SCORE:
69.5714
COIL:
0.6017
CONS_SCORE:
0.4278
DSS_SCORE:
0.3937
HELIX:
0.0064
FCONS_SCORE:
0.8601
RIG_SCORE:
0.8055
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R600S
TCGA-05-4396
LUAD
TCGA
VFTPTIE
DEG_SCF_FBW7_2
0.2778
p.R600S
DO23838
LUAD
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.2778
p.P606H
TCGA-AB-2821
LAML
TCGA
VFTPTIE
DEG_SCF_FBW7_2
0.1111
p.P606H
DO21655
LAML
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.1111
p.P595A
TCGA-BQ-5876
KIRP
TCGA
VFTPTIE
DEG_SCF_FBW7_2
0.7503
p.P595A
DO20759
KIRP
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.7503
p.A584V
TCGA-CV-7245
HNSC
TCGA
VFTPTIE
DEG_SCF_FBW7_2
0.1111
p.A584V
DO14322
HNSC
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.1111
p.T594A
TCGA-D8-A1XK
BRCA
TCGA
VFTPTIE
DEG_SCF_FBW7_2
0.825
p.T594A
DO4749
BRCA
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.825
p.R600H
TCGA-EO-A22U
UCEC
TCGA
VFTPTIE
DEG_SCF_FBW7_2
0.2778
p.R600H
DO43755
UCEC
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.2778
p.A584S
DO229026
LICA
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.1111
p.A602S
DO229026
LICA
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.2222
p.V592I
DO51082
PRAD
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.5965
p.V592I
SIDM00343
Glioblastoma
GDSC
VFTPTIE
DEG_SCF_FBW7_2
0.5965
p.V592I
SIDM00027
Kidney Carcinoma
GDSC
VFTPTIE
DEG_SCF_FBW7_2
0.5965
p.V592I
SIDM01101
Neuroblastoma
GDSC
VFTPTIE
DEG_SCF_FBW7_2
0.5965
p.V592I
SIDM00105
Ovarian Carcinoma
GDSC
VFTPTIE
DEG_SCF_FBW7_2
0.5965
p.V592I
SIDM00093
Ovarian Carcinoma
GDSC
VFTPTIE
DEG_SCF_FBW7_2
0.5965
p.A608P
DO229229
THCA
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.0556
p.S607P
DO229224
THCA
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.0833
p.S607P
DO229234
THCA
ICGC
VFTPTIE
DEG_SCF_FBW7_2
0.0833
p.T594S
ACH-001970
Metastasis
CCLE
VFTPTIE
DEG_SCF_FBW7_2
0.8227
Drug responses associated with PTPRF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFTPTIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10586
Receptor-type tyrosine-protein phosphatase F
DEG_SCF_FBW7_2
592:598
VFTPTIE
FBXW7
0.9758
More...