DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VFVYIE
Uniprot ID:
Q9NQ66
Source protein:
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1
Source gene:
PLCB1
Class:
LIG_APCC_ABBA_1
Location:
789:794
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7193
ASA_SCORE:
20.2833
COIL:
0.021
CONS_SCORE:
0.5235
DSS_SCORE:
0.0397
HELIX:
0.0027
FCONS_SCORE:
1.3794
RIG_SCORE:
0.9736
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P787T
TCGA-17-Z010
LUAD
TCGA
VFVYIE
LIG_APCC_ABBA_1
0.2778
p.E779K
TCGA-4Z-AA7Y
BLCA
TCGA
VFVYIE
LIG_APCC_ABBA_1
0.0556
p.E779K
DO51867
BLCA
ICGC
VFVYIE
LIG_APCC_ABBA_1
0.0556
p.K796E
TCGA-85-8288
LUSC
TCGA
VFVYIE
LIG_APCC_ABBA_1
0.2778
p.K796E
DO26963
LUSC
ICGC
VFVYIE
LIG_APCC_ABBA_1
0.2778
p.D801H
TCGA-95-7948
LUAD
TCGA
VFVYIE
LIG_APCC_ABBA_1
0.1389
p.D801H
DO25133
LUAD
ICGC
VFVYIE
LIG_APCC_ABBA_1
0.1389
p.L784V
DO48360
BLCA
ICGC
VFVYIE
LIG_APCC_ABBA_1
0.1944
p.T785M
DO222765
COCA
ICGC
VFVYIE
LIG_APCC_ABBA_1
0.2222
p.T785M
SIDM00685
Glioblastoma
GDSC
VFVYIE
LIG_APCC_ABBA_1
0.2222
p.T785M
ACH-000819
Brain Cancer
CCLE
VFVYIE
LIG_APCC_ABBA_1
0.2222
p.T785M
LN-18
central_nervous_system
COSMIC
VFVYIE
LIG_APCC_ABBA_1
0.2222
p.P800S
DO229275
THCA
ICGC
VFVYIE
LIG_APCC_ABBA_1
0.1667
p.K796R
SIDM00511
Small Cell Lung Carcinoma
GDSC
VFVYIE
LIG_APCC_ABBA_1
0.2778
p.K796R
ACH-000257
Lung Cancer
CCLE
VFVYIE
LIG_APCC_ABBA_1
0.2778
p.K796R
COR-L279
lung
COSMIC
VFVYIE
LIG_APCC_ABBA_1
0.2778
p.V799A
SIDM00217
Colorectal Carcinoma
GDSC
VFVYIE
LIG_APCC_ABBA_1
0.1944
p.V799A
ACH-000999
Colon/Colorectal Cancer
CCLE
VFVYIE
LIG_APCC_ABBA_1
0.1944
p.V799A
SNU-1040
large_intestine
COSMIC
VFVYIE
LIG_APCC_ABBA_1
0.1944
p.R780G
SIDM00638
Cervical Carcinoma
GDSC
VFVYIE
LIG_APCC_ABBA_1
0.0833
p.R780G
ACH-001360
Cervical Cancer
CCLE
VFVYIE
LIG_APCC_ABBA_1
0.0833
p.R780G
MS751
cervix
COSMIC
VFVYIE
LIG_APCC_ABBA_1
0.0833
p.I793T
SIDM00225
Melanoma
GDSC
VFVYIE
LIG_APCC_ABBA_1
0.5966
p.I793T
ACH-002143
Skin Cancer
CCLE
VFVYIE
LIG_APCC_ABBA_1
0.5966
p.I793T
IST-MEL1
skin
COSMIC
VFVYIE
LIG_APCC_ABBA_1
0.5966
p.A788V
SIDM01729
Endometrial Carcinoma
GDSC
VFVYIE
LIG_APCC_ABBA_1
0.3056
p.A788V
ACH-000909
Endometrial/Uterine Cancer
CCLE
VFVYIE
LIG_APCC_ABBA_1
0.3056
p.P800Q
ACH-000737
Lung Cancer
CCLE
VFVYIE
LIG_APCC_ABBA_1
0.1667
p.P784A
EJM
haematopoietic_and_lymphoid_tissue
COSMIC
VFVYIE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with PLCB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFVYIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQ66
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1
LIG_APCC_ABBA_1
789:794
VFVYIE
APC,CDC20,FZR1
0.7193
More...