DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VFVYND
Uniprot ID:
A8MW92
Source protein:
PHD finger protein 20-like protein 1
Source gene:
PHF20L1
Class:
LIG_APCC_ABBA_1
Location:
924:929
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5064
ASA_SCORE:
83.95
COIL:
0.5695
CONS_SCORE:
0.3673
DSS_SCORE:
0.5949
HELIX:
0.15
FCONS_SCORE:
0.9047
RIG_SCORE:
0.7997
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V924I
TCGA-66-2787
LUSC
TCGA
VFVYND
LIG_APCC_ABBA_1
0.5965
p.E934K
TCGA-B5-A11E
UCEC
TCGA
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
DO227987
COCA
ICGC
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
DO41644
UCEC
ICGC
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
SIDM00193
Colorectal Carcinoma
GDSC
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
SIDM00214
Colorectal Carcinoma
GDSC
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
SIDM00359
Colorectal Carcinoma
GDSC
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
ACH-000565
Colon/Colorectal Cancer
CCLE
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
ACH-000955
Colon/Colorectal Cancer
CCLE
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
ACH-000991
Colon/Colorectal Cancer
CCLE
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
SNU-407
large_intestine
COSMIC
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
RCM-1
large_intestine
COSMIC
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E934K
SNU-81
large_intestine
COSMIC
VFVYND
LIG_APCC_ABBA_1
0.1944
p.E927Q
DO234220
ESAD
ICGC
VFVYND
LIG_APCC_ABBA_1
0.6744
p.T933A
SIDM00143
Small Cell Lung Carcinoma
GDSC
VFVYND
LIG_APCC_ABBA_1
0.2222
p.T933A
ACH-000803
Lung Cancer
CCLE
VFVYND
LIG_APCC_ABBA_1
0.2222
p.T933A
HT
haematopoietic_and_lymphoid_tissue
COSMIC
VFVYND
LIG_APCC_ABBA_1
0.2222
p.T933A
COLO-668
lung
COSMIC
VFVYND
LIG_APCC_ABBA_1
0.2222
p.T934A
HT
haematopoietic_and_lymphoid_tissue
COSMIC
VFVYND
LIG_APCC_ABBA_1
0.1944
Drug responses associated with PHF20L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VFVYND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MW92
PHD finger protein 20-like protein 1
LIG_APCC_ABBA_1
924:929
VFVYND
APC,CDC20,FZR1
0.5064
More...