DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGFTPPTS
Uniprot ID:
Q16204
Source protein:
Coiled-coil domain-containing protein 6
Source gene:
CCDC6
Class:
DEG_SCF_FBW7_1
Location:
377:384
E3 ligase:
FBXW7
DEGRON score:
0.9991
ASA_SCORE:
80.55
COIL:
0.9465
CONS_SCORE:
0.3841
DSS_SCORE:
0.4135
HELIX:
0.0228
FCONS_SCORE:
0.9862
RIG_SCORE:
0.7022
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N394Y
TCGA-67-3771
LUAD
TCGA
VGFTPPTS
DEG_SCF_FBW7_1
0.0556
p.N394Y
DO25797
LUAD
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.0556
p.T383A
TCGA-AJ-A3EK
UCEC
TCGA
VGFTPPTS
DEG_SCF_FBW7_1
0.7139
p.T383A
DO41584
UCEC
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.7139
p.G389E
TCGA-BR-8680
STAD
TCGA
VGFTPPTS
DEG_SCF_FBW7_1
0.1944
p.G389E
DO47769
STAD
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.1944
p.P368H
TCGA-D3-A1Q6
SKCM
TCGA
VGFTPPTS
DEG_SCF_FBW7_1
0.0833
p.P368H
DO228971
LICA
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.0833
p.P368H
DO37450
SKCM
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.0833
p.P382Q
TCGA-EE-A3AD
SKCM
TCGA
VGFTPPTS
DEG_SCF_FBW7_1
0.5924
p.P382Q
DO37707
SKCM
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.5924
p.R387I
TCGA-EO-A3KX
UCEC
TCGA
VGFTPPTS
DEG_SCF_FBW7_1
0.25
p.R387I
DO219774
UCEC
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.25
p.G369C
TCGA-ER-A19F
SKCM
TCGA
VGFTPPTS
DEG_SCF_FBW7_1
0.1111
p.G369C
DO37679
SKCM
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.1111
p.T380M
TCGA-G4-6627
COAD
TCGA
VGFTPPTS
DEG_SCF_FBW7_1
0.8534
p.T380M
DO9098
COAD
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.8534
p.T376M
DO233946
GACA
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.75
p.L385M
DO229015
LICA
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.3056
p.P381Q
DO229034
LICA
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.7035
p.P381L
DO227759
PBCA
ICGC
VGFTPPTS
DEG_SCF_FBW7_1
0.7582
Drug responses associated with CCDC6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VGFTPPTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16204
Coiled-coil domain-containing protein 6
DEG_SCF_FBW7_1
377:384
VGFTPPTS
FBXW7
0.9991
More...